Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5000 ATGGCCAAGAAGGGTTGGTTTAGCATGGTAAAGAGGCTCTTTACAAGGGACACACATTCCACTCAAGAGAAGAAGGAGAAAAGAAAGAAGTGGGTATTTGGGAGGCTAAAGAACAAGAAATTTCCTTCAATTGAAGCACCACCACCATTAAAAGAAAAAAAATTATGTGAACCTGAAGAACACAACAAGCATGCTTTAACAGTTGCTATTGCCTCAGCTGCTGCTGCTGAAGCTGCTTTTACTGCTGCTCAGGTTGCAGTTGAAGTTGTTAGGTTCCAATCTGCTCATCAATGTAAAGGAAAACCAGAAGAAGTTATGCTTGTTAAAACTAAGCATAATGCTTCTCAATCAACACACAAGTGCAAGTTAAAGATTGAAGAATCTTCAGCTATCAAAATTCAAACAACATTTAGAGGTTACATAGCAAGGAAAGCTTTGAAGGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGCAGAGCTGTAAGACGGCAAGCTATGAGTACTCTTAAGTGTTTGCAGTCCATTGTGAGTATTCAGTCACAGGTCATTGCAAGGAAACTCCAAATGGTTGAAGGAAGGTTGAATTGTGGTGAACATGAAAAGATGCAAGGTTCAAGAGACAAGATCATAAGGATGGACTCAAACAGTGAGAGAAAGTGGGATGACAGCGTTTTATTTAAGAAAGAGATAGATTCGTCTAGTATAAGCAAGAAAGAAGCTATTATAAGGAAAGAAAGAGTAAAAAAATACTCATATAACCATAGGAAATCAGCTGAATCAGAAAGAAACAACGGAAGATGGAAGTACTGGATGGAGCAGTGGATAGACACAAAGCATTCTAAGAGTAAAGAACTTGAAGATTTAGACTCAGATTTCAGTTCAAATTGTAGAGAAGTGGAAGATTGTGGAAGAAGACAACTAAATTTTGAGGGAGAAGATCATTCGTTTCAAAGCTCTCACACAATTCCAACATACATGGTTGCAACAAAATCAACACAAGCAAAAGTAAGATCAACAAGCACACCAAAAACAAGGATAGGAAGGAATTGGGACATGAACTCTGATTGCTATTCACCAAGCAAAAGAAAGCTCAATAATAATCGACAAGGATCTCCTAGCTTAAAAGGTCACTCAAGCTAA 1149 0.3812 MAKKGWFSMVKRLFTRDTHSTQEKKEKRKKWVFGRLKNKKFPSIEAPPPLKEKKLCEPEEHNKHALTVAIASAAAAEAAFTAAQVAVEVVRFQSAHQCKGKPEEVMLVKTKHNASQSTHKCKLKIEESSAIKIQTTFRGYIARKALKALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVIARKLQMVEGRLNCGEHEKMQGSRDKIIRMDSNSERKWDDSVLFKKEIDSSSISKKEAIIRKERVKKYSYNHRKSAESERNNGRWKYWMEQWIDTKHSKSKELEDLDSDFSSNCREVEDCGRRQLNFEGEDHSFQSSHTIPTYMVATKSTQAKVRSTSTPKTRIGRNWDMNSDCYSPSKRKLNNNRQGSPSLKGHSS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5000 382 MobiDBLite consensus disorder prediction 333 382 - -
Mal3g5000 382 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Mal3g5000 382 SMART iq_5 125 147 IPR000048 GO:0005515
Mal3g5000 382 PANTHER IQ-DOMAIN 5-RELATED 1 379 - -
Mal3g5000 382 Gene3D - 126 177 - -
Mal3g5000 382 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Mal3g5000 382 Pfam IQ calmodulin-binding motif 128 147 IPR000048 GO:0005515
Mal3g5000 382 PANTHER IQ-DOMAIN 11 1 379 - -
Mal3g5000 382 Pfam Protein of unknown function (DUF4005) 323 357 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5000 Mal-Chr3 130046280 130048482 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5000 3 367 IQD Protein Family AT5G13460 42.821 1.81e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5000 - - gmx:100777067 469.159