Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4999 ATGAATGGTGTGACACAGCTTGATGAAACAGATGACTCTGATTTTGTTGAAGTTGATCCAACCGGTAGATATGGCAGATACCATGAAATTCTTGGCAAAGGAGCTTCCAAAACAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAATCAAATCAAACTATATGATTTCCTACAAAACCCCGAAGATCTCGAGCGGCTTTACTGCGAAATTCATCTCCTCAAGACGTTGAAGCACAAAAACATTATGAAATTTTACACTTCTTGGGTTGATACTGCAAATAGGAATATTAACTTTGTTACCGAGTTGTTCACTTCTGGTACTCTTAGACAGTATAGGCTAAAGCACAAGAGGGTTAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATCTTGCAAGGACTTCTATATCTTCATAGCCATGACCCACCTGTGATCCATAGAGATCTTAAATGTGATAATATTTTCATTAATGGTAACCAAGGTGAAGTGAAGATTGGAGATCTTGGTTTGGCAGCGATTCTCCGGAAATCACATGCTGCTCATTGTGTAGGAACGCCAGAATTCATGGCACCAGAAGTATATGAAGAGGAATATAATGAATTAGTTGACATATATTCCTTTGGTATGTGCGTATTAGAGATGGTCACGTTTGAATATCCTTATAGTGAATGCAGCCATCCAGCACAAATCTACAAGAAAGTTTCTTCTGGGAAAAAACCAGATGCTTTGTATAAAGTGAAGGATCCAGAAGTGCGAGAGTTTATTGAGAAATGTCTTGCAACAGTGTCTCTAAGGCTCTCTGCAAGGGAGCTTCTAGATGATCCTTTTCTTCGAATTGATGATGACGAATATGATTTGGGATCGGTAGATGTTGGAGAGTTTGGTGACTTGGGTCCTCTTGTTAGTCAGTCATACTTTTCACTCGACCGCAGCTATAGTAACATAAGTACTGAATACTCGAATGGTTTTGGGCATGAAGTCGATTGGTATTCTCATCCAACTGAGATTGAACATGGAATTGAACTTTTCGAGTGCCATGACGATGAACCCTCCAAAAATGTTGACATAAGCATCAAAGGCAAGAGGAACGACGACGGTGGCATCTTTTTGAAACTAAGAATTGCAGACAAAGAAGGTCATATTCGAAACATTTATTTCCCGTTTGACATAGAGTTGGACACAGCATTAAGTGTAGCAACTGAAATGGTTGCGGAACTCGACATTACTGATCAAGATGTTACCAGAATAGCCGGTATGATAGATGGAGAAATTGCTTCCTTGGTACCTGAATGGAGGCTAGGACCAGGAATTGAGGAAACCATCAACTATGCAAATCAAAGTTTCTGTGACAATTGTGTGTCTAATCATACTACAGTTACGGGTTTTCTTTCACGTAATCAAAGTGGAAAAAACTTGCAGCTTCTTCAATGCTGCACGCACGGATGTGCTTCAATGCACGGCCGGTTTGAGGAGATTACGTTCCAATCTGAGGACTATGACGACATCCACGTTAGCGAGGATGCTCCTAACATATCAAGCGAATCAGATTTCTTGCAGTATCAGGAATCATGGCATCAGCACGAAAGCCGTGAACTGAGTCCTGTAGAGTCTACTCGAAGCCATTCTGACGAACAATATGAAATATTAGATAAATCATTGTTGACTGAAGATAAAAGAGATGGTATACGGGAAAACAGTTTCAGACCCAACACAGGAAACTCCTTGAAAAATTTAGCAGGAAACCATTATTTTTCTACTATTGGTTCGCTATATTGTGGAGCTGAGAATGACTATGAGAAAGAGATTCAACATGAGTTGAGATGGCTAAAAGCAAAATATCAAATGGAGTTAAGGGAACTTAAGGATAAACAGTTGGGTGTAGAAGCTAAATATCCACATATTGAGCACAAAACACCACCAGAAACAGTAAACGGATTCGATAATGGGACTCACTTTGATAATTACAGGGATTGTGATTCCAGTTACAGTTCTCGAGAACACAAGAACCACCCAAATTTGGACACCCGAAGGGCCCAAAATTGCGCGTTGACGTGTTCTAATGAAGAAGATAATATGCTTACTGCAAAGAGTTTTTACACAAGATTGTTGCTTCCAGACACTCTACACAGGACTGTTTCTCTCCCTGTTGATGCTGTGGATGTATAA 2181 0.4003 MNGVTQLDETDDSDFVEVDPTGRYGRYHEILGKGASKTVYRAFDEYQGIEVAWNQIKLYDFLQNPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTELFTSGTLRQYRLKHKRVNIRAVKHWCRQILQGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEEYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVSSGKKPDALYKVKDPEVREFIEKCLATVSLRLSARELLDDPFLRIDDDEYDLGSVDVGEFGDLGPLVSQSYFSLDRSYSNISTEYSNGFGHEVDWYSHPTEIEHGIELFECHDDEPSKNVDISIKGKRNDDGGIFLKLRIADKEGHIRNIYFPFDIELDTALSVATEMVAELDITDQDVTRIAGMIDGEIASLVPEWRLGPGIEETINYANQSFCDNCVSNHTTVTGFLSRNQSGKNLQLLQCCTHGCASMHGRFEEITFQSEDYDDIHVSEDAPNISSESDFLQYQESWHQHESRELSPVESTRSHSDEQYEILDKSLLTEDKRDGIRENSFRPNTGNSLKNLAGNHYFSTIGSLYCGAENDYEKEIQHELRWLKAKYQMELRELKDKQLGVEAKYPHIEHKTPPETVNGFDNGTHFDNYRDCDSSYSSREHKNHPNLDTRRAQNCALTCSNEEDNMLTAKSFYTRLLLPDTLHRTVSLPVDAVDV* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4999 726 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 715 - -
Mal3g4999 726 SMART serkin_6 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4999 726 SUPERFAMILY Protein kinase-like (PK-like) 27 283 IPR011009 -
Mal3g4999 726 CDD STKc_WNK 23 282 - -
Mal3g4999 726 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
Mal3g4999 726 Gene3D - 371 467 - -
Mal3g4999 726 Coils Coil 615 635 - -
Mal3g4999 726 ProSiteProfiles Protein kinase domain profile. 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4999 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Mal3g4999 726 Gene3D Phosphorylase Kinase; domain 1 9 106 - -
Mal3g4999 726 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4999 726 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 375 427 IPR024678 GO:0004674|GO:0005524
Mal3g4999 726 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4999 Mal-Chr3 130026795 130030072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4999 128 725 MAP Kinase Kinase Kinase AT3G04910 52.269 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mal3g4999 Pkinase 7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4999 K08867 - gmx:100775959 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4999 3 130026795 130030072 Mal3g4999 3 130026795 130030072 ECH
Mal3g4999 3 130026795 130030072 Mal1g1355 1 17535691 17538904 PCT