Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4996 ATGGCTTCACAGCAACACGACACCGTTTTCCCCGAAGAAGACATCGACGACGACGACGAAGAATTTCACGAATACGAAGAAGAAGATGAAGAAGAAGACGACGTTTTAGTCGACGACGAAGAAAACGATCCTCCTTCTGCTTCCATCTCCGCTCCCTCCGTCACCGTCGCCGTTCCCGGAGGATTCAGACCTCCAATTCTAACTCCCACCGCTACGACGATCGTCTTCGCTGACTCCTCCTTCTCCTCCGATTCAAAACGTCAACGTTTGGATCAAATTGAGGAGAAAAAACCACCGCTAGTAGAAGATTCACGGAAGCTTTTTCAACGTCTATGGACCGACGAAGATGAGATGGAACTTTTACAAGGTTTTCTCGACTACACAACACAGAGAGGTTCATCTCACCACAACGACACCGCTCAATTCTACGATCAAATCAAATCGAAGCTTCAACTCGATTTCAACAAGAATCAACTCGTTGAGAAGATCCGAAGGTTGAAGAAGAAATACAGAAATATTGTAAGCAAAATGAGCTCCGGCAAGGAATTCGTCTTCAAAACCGCTCACGATCAAGCCACGTTTGAAATCTCTCGCAAGATCTGGAACAACGTGGCGCCAATCGCCGGTGATATTGCTATAGACGACGACGAAATCAACCTCAATCCAAGTCCTAACCCTAACCTCAATTTCACTCCTGTAATTCTCAAGACTGAGGCAAATTCAACCACGCGGAAGCGTTCACGGCCTCGATCTGCTTCAATCAGAAGCTTCGAGAAGCGTGAATCGAATGACGCAGCAGCATCAAACAGAGATCGTGATTTTATCAATATCAACCTCAACAATCCTAATCCATATCATAATCACAGTTTTAATCCTAATGCTTATGCTAATACTAATACTGCTGCTACTGCTACCGCTGCCGCTACTGTTAACACTGCAATAGCACCTACAATTACTGCTCCTAATGCTAATACTAATACTGCAATTAATGCTAATAACTATAGTAATAATTGTAGTACCGTTGGGAATGGTGTTGCTGGTGTGATTGAAGAGACAGTGAGGAGTTGTTTATCTCCGTTGAAGGAACTGATGGCTGGTGCAATAGGAGGAGGACCGTTCGGATCGCGCGGCGGCTTCATGAATCCGTTACCGTTTCAGATGATGAATTTAGGTTTTGGTGGTGGAGAATTGGTGGATGAGAAATGGAGGAAGCAACAGATTTTGGAATTGGAAGTGTATTCAAAGAGGTTGGAGTTGGTTCAGGATCAGATCAAAGCATCTCTTGATGAGTTGCGTGGATCAGGAGGATGA 1311 0.4477 MASQQHDTVFPEEDIDDDDEEFHEYEEEDEEEDDVLVDDEENDPPSASISAPSVTVAVPGGFRPPILTPTATTIVFADSSFSSDSKRQRLDQIEEKKPPLVEDSRKLFQRLWTDEDEMELLQGFLDYTTQRGSSHHNDTAQFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNIVSKMSSGKEFVFKTAHDQATFEISRKIWNNVAPIAGDIAIDDDEINLNPSPNPNLNFTPVILKTEANSTTRKRSRPRSASIRSFEKRESNDAAASNRDRDFININLNNPNPYHNHSFNPNAYANTNTAATATAAATVNTAIAPTITAPNANTNTAINANNYSNNCSTVGNGVAGVIEETVRSCLSPLKELMAGAIGGGPFGSRGGFMNPLPFQMMNLGFGGGELVDEKWRKQQILELEVYSKRLELVQDQIKASLDELRGSGG* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4996 436 MobiDBLite consensus disorder prediction 240 280 - -
Mal3g4996 436 PANTHER BNAANNG10740D PROTEIN-RELATED 1 435 IPR007592 GO:0006355
Mal3g4996 436 Coils Coil 156 176 - -
Mal3g4996 436 MobiDBLite consensus disorder prediction 11 41 - -
Mal3g4996 436 MobiDBLite consensus disorder prediction 241 268 - -
Mal3g4996 436 Pfam Protein of unknown function, DUF573 108 202 IPR007592 GO:0006355
Mal3g4996 436 Coils Coil 410 430 - -
Mal3g4996 436 PANTHER BNAANNG10740D PROTEIN 1 435 - -
Mal3g4996 436 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4996 Mal-Chr3 129981153 129982463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4996 45 432 GeBP Transcription Factor Family AT5G28040 40.723 2.79e-84 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Mal3g4996 DUF573 2.7e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4996 - - mtr:MTR_7g114600 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4996 3 129981153 129982463 Mal1g1359 1 17557025 17558137 PCT