Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4988 ATGGCAAAGGTGGATCTGTCTAGGATATCTCTTAGGCCATTCAAGCTAACAGACGTTGACGATTTCTTGTTATGGGCTGGGGACGATGAAGTAACCAAAAACATCCGATGGAAAACATGCAATTCAAGGGAAGAAGCTCAAAATTTCATCAAAGATGTCTGCATACCTCACCCTTGGCGCCGTTCGATCTGTCTCGACGACCGTTCGATCGGTTTTGTTTCTGTGTATCCTTGGTCGGGTGATGATAGGTGCAAAGCTGACATAGGTTATGCTGTTGCTTCTAACTATTGGGGTCAAGGGATAGCCACAAAAGCAATCAAAATTGCTCTCTCTCAAGTGTTCAATGATTTTTCTGATTTGTTAAGGTTGCAGGCTTTTACTTACGTGGATAACAAGGCTTCTCAGAGAGTTTTGGAAAAGGCTGGCTTCCTTAGAGAGGGTCTTCTTAGAAAGTATACTTATATCAAAGGTACCATCATGGATTTGGCTGTTTTAAATTCGTTCTTAATGCTTTTGCCAACGAGCATTCCGCAAATGAACTTTAAATTTGATATGCAACAAGGAATTGCCTTATTATCTAAAGGGCATGATTTAAATTATGTACAGATGCTGTCACTTTAG 621 0.4058 MAKVDLSRISLRPFKLTDVDDFLLWAGDDEVTKNIRWKTCNSREEAQNFIKDVCIPHPWRRSICLDDRSIGFVSVYPWSGDDRCKADIGYAVASNYWGQGIATKAIKIALSQVFNDFSDLLRLQAFTYVDNKASQRVLEKAGFLREGLLRKYTYIKGTIMDLAVLNSFLMLLPTSIPQMNFKFDMQQGIALLSKGHDLNYVQMLSL* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4988 206 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 165 IPR000182 GO:0016407
Mal3g4988 206 Gene3D - 3 168 - -
Mal3g4988 206 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 164 IPR016181 -
Mal3g4988 206 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 4 169 - -
Mal3g4988 206 Pfam Acetyltransferase (GNAT) domain 8 143 IPR000182 GO:0016407
Mal3g4988 206 CDD NAT_SF 63 123 - -
Mal3g4988 206 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4988 Mal-Chr3 129877164 129879930 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mal3g4988 Acetyltransf_3 4.9e-24 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4988 - - gmx:100527210 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4988 3 129877164 129879930 Mal3g4988 3 129877164 129879930 ECH