Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4982 ATGGGATGTGTGATTGGTCGCCAAGCCTTGTCAAACAAGGGTTTAAGTGGCCAACAAAGTAACAGGAACAAGGTTGATGAAGCCTCCGTCGCGGAGAAGGCGAGTAATGGCAATGGGAAGGCAGTGGTAGAGGTTGAGAATGGTGAGAAGGAGAAGAGTGGTGTTGGTGTTGAGCGGTCTAGAGGTGAAATAAGAATAAGATCAAAGCCGAATCCAAGGCTAAGTAATCCACCTAAGCATTTACATGGTGAACAGGTTGCTGCTGGATGGCCACCTTGGCTCACTGCAGTCTGTGGGGAAGCTCTCAGTGGTTGGATTCCGCGAAAGGCTGACACATTTGAGAAAATTGATAAGATTGGGCAAGGAACTTATAGCAATGTGTACAAAGCTAAAGACTTAATGACTGGTAAAATTGTTGCTCTGAAGAAGGTTCGATTCGACAATTTGGAACCTGAGAGCATTAAATTCATGGCTAGAGAGATTCTTATTCTGCGAAGGTTGGATCATCCAAATGTTATTAAGCTGCAAGGTTTAGTTACATCAAGAATGTCCTGTAGTTTGTATTTAGTGTTTGATTGCATGGAGCATGATTTAGCTGGACTTGCTGCAAGCCCAGTAATCAGGTTTACAGAGTCTCAGATAAAATGTTACATGCATCAGCTGCTATCAGGACTTCAGCATTGTCATAACCGTCATGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAGCACTCAAGATTGCTGACTTTGGATTAGCATCCGTTTTTGATGCAAACCATAGGCATCCCATGACTAGTCGTGTAGTAACACTTTGGTATCGGCCTCCTGAGTTACTTCTTGGTGCCACACATTACGGTGTGGGTATAGACCTTTGGAGTGCTGGATGTATTCTAGGAGAGTTATTGGTCGGCAAACCAATTATGCCCGGCCGTACAGAGGTGGAGCAACTGCATAAGATATACAAATTATGTGGTTCACCTTCTGATGAATACTGGAAGAAGTCAAAGTTGCCCAATGCTACATTGTTTAAACCTCGAGAGCCATACAAGAGATGCATAAGAGAGACATTTAAAGCGTTTCCACCGTCTGCTCTACCCCTTATTGATAATCTTCTTGCAATTGATCCTGTAGAACGGAAAACCGCCTCAGACGCTTTAAGAAGTGAGTTCTTTACCACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATACCCCCCAAGCAAAGAAATGGATGCTAAAAGACGGGATGATGAAGTGAGGAGACAAAGAGCTGCGAGCAAAGCTCACGGTGATGGTTCAAAGAAGTATCGTACACTTGAACGTGCTGTGAAAGCTATGCCTGCTCCCGAAGCCAATGCTGAGCTTCAATCCAATATTGATAGAAGACGTCTAATTACTCATGCAAATGCCAAAAGCAAGAGTGAAAAGTTCCCTCCACCGCATCAAGATGGTCGGCTCGGCTTTCCTTTGGGATCTTCACATCATATTGATCCAGATACTATTCCTATTGATGTATCTTTCACTTCAACCACATATACCTATTCAAAGGAACCATTCCATGCTTGGTCGGGTCCAATTGGTAATGCTGCTGATATTGGAGTGCCGAAGCGGAAAAAATACACTGCAGGAGAGGCATGGGATTTATTAAAACCGCAGAAAGGTGCCCCCAAAGATAAGTTTAAAGGAAAGGCAATTATAGCATAG 1728 0.4329 MGCVIGRQALSNKGLSGQQSNRNKVDEASVAEKASNGNGKAVVEVENGEKEKSGVGVERSRGEIRIRSKPNPRLSNPPKHLHGEQVAAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDLMTGKIVALKKVRFDNLEPESIKFMAREILILRRLDHPNVIKLQGLVTSRMSCSLYLVFDCMEHDLAGLAASPVIRFTESQIKCYMHQLLSGLQHCHNRHVLHRDIKGSNLLIDNEGALKIADFGLASVFDANHRHPMTSRVVTLWYRPPELLLGATHYGVGIDLWSAGCILGELLVGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRETFKAFPPSALPLIDNLLAIDPVERKTASDALRSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEVRRQRAASKAHGDGSKKYRTLERAVKAMPAPEANAELQSNIDRRRLITHANAKSKSEKFPPPHQDGRLGFPLGSSHHIDPDTIPIDVSFTSTTYTYSKEPFHAWSGPIGNAADIGVPKRKKYTAGEAWDLLKPQKGAPKDKFKGKAIIA* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4982 575 Pfam Protein kinase domain 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4982 575 SUPERFAMILY Protein kinase-like (PK-like) 108 404 IPR011009 -
Mal3g4982 575 MobiDBLite consensus disorder prediction 1 82 - -
Mal3g4982 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Mal3g4982 575 Gene3D Phosphorylase Kinase; domain 1 100 195 - -
Mal3g4982 575 MobiDBLite consensus disorder prediction 11 25 - -
Mal3g4982 575 ProSiteProfiles Protein kinase domain profile. 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4982 575 SMART serkin_6 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4982 575 Gene3D Transferase(Phosphotransferase) domain 1 196 437 - -
Mal3g4982 575 MobiDBLite consensus disorder prediction 44 68 - -
Mal3g4982 575 MobiDBLite consensus disorder prediction 415 442 - -
Mal3g4982 575 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Mal3g4982 575 PANTHER CELL DIVISION PROTEIN KINASE 44 547 - -
Mal3g4982 575 MobiDBLite consensus disorder prediction 405 442 - -
Mal3g4982 575 PANTHER OS01G0367700 PROTEIN 44 547 - -
Mal3g4982 575 CDD STKc_CDK9_like 113 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4982 Mal-Chr3 129814031 129818618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4982 105 435 Core Cell Cycle Gene Families AT5G10270 52.738 1.77e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mal3g4982 Pkinase 3.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4982 K08819 - gmx:100786837 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1381 1 17783661 17790652 Mal3g4982 3 129814031 129818618 ECH
Mal3g4982 3 129814031 129818618 Mal3g4982 3 129814031 129818618 ECH
Mal3g4982 3 129814031 129818618 Mal1g1381 1 17783661 17790652 PCT