Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4980 ATGGCTGCTGATTTACTTCATATGCTAAAAACTTCGGATTATGCGTCCGTAATATCGATGAACCTATTTGTAGCATTGCTATGTGCTTGCATAGTCATTGGTCATCTTCTTGAAGAGAATCGGTGGGTGAATGAGTCTATCACTGCCCTTTTGATAGGTCTTTGCACTGGTGTGGTCATTTTGTGGATAAGTGGTGGTAAAAGCTCGCATCTGCTTGTTTTTAGTGAAGATCTTTTTTTTATATACCTTCTGCCTCCCATCATCTTTAATGCCGGGTTTCAGGTCAAAAAGAAGCGGTTTTTTGAGAATTTCATCACCATCATGTTGTTTGGTGCTATTGGTACATTAATAAGTTGTAGCATCATAACTTTTGGTGTATTACAAATTTTTAAGAGAATTGGTATTGGTACGCTTGCTCTAGCGGAGGCTGTTGCAATTGGTGCAATATTTGCTGCAACAGATTCCGTGTGCACGTTGCAGGTGCTAAACCAGGATGAGACACCTTTGCTATACAGTCTTGTATTTGGGGAAGGTGTTGTGAATGATGCTACTTCAGTGGTGCTTTTCAATGCAGTCAAAAGTTTTGATCTTGAACAACTTGACCATGGAATTGCTTTGCAATTTTTTGCCAACTTCTTGTATCTGTTTATAGCAAGCACCATGCTTGGAGTTTTGGGTGGTCTACTTAGTGCTTACATTATCAAAAAGCTCTATTTTGGCAGGCACTCAACTGATCGTGAGGTTGCTCTCATGATACTAATGGCATACCTTACCTACATTCTAGCTGAATTATGGTATCTGAGTGGCATTCTCACTGTATTCTTTTGTGGGATTGTAATGTCTCATTATACATGGCATAATGTGACTGAGAGCTCAAGAATCACGACCAAACATGCTTTTGCAACCTTGTCATTTGTTGCTGAGACATTTCTCTTCCTTTATGTTGGTATGGATGCATTGGACATTGAAAAATGGAGATTTGTTAGTGATAGACCTGGAACATCTGTTATTGTAAGTTCAGTATTATTAGCTCTAGTACTAATTGGAAGAGCAGCATTTGTTTTCCCCTTATCCTTTTTATCCAACTTGACTAAAAAGTCACAAAATGAGAAAATAAGCTTCAGGAAACAGGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCCTATAATGAGTTCACTATGTCGGGGCATACTGTACTACGATTCAATGCTATCATGATCACCAGTACCATCTCCGTTGTGCTTGTCAGTACAATGGTGTTCGGAATGATGACTAAGCCACTGATAAGGTATTTGGTACCTCTTGGTCCCCCACCAAAACGGAAAAACAGCATGGCTAATCTTGAAGAATCTTCACCAAAATCAATCACTGTGCCATTCCTTAATGGGAACCACGATTCAGAAGCTGATACTGATGGCAATGATTCTCAAGGTCCAAGCAGTATTCGTGACTTACTTACAACTCCAACACACACGGTTCATCGATTATGGCGTAAGTTTGATGATGCAGTTATGCGTCCAGTTTTTGGTGGTAGAGGTTTTGTTCCTGTTGCTCCTACCTCGCCAACGGAATGCAACGGCCAACAGAGTCCGCAATGGGATTGA 1626 0.4059 MAADLLHMLKTSDYASVISMNLFVALLCACIVIGHLLEENRWVNESITALLIGLCTGVVILWISGGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKRFFENFITIMLFGAIGTLISCSIITFGVLQIFKRIGIGTLALAEAVAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAVKSFDLEQLDHGIALQFFANFLYLFIASTMLGVLGGLLSAYIIKKLYFGRHSTDREVALMILMAYLTYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVAETFLFLYVGMDALDIEKWRFVSDRPGTSVIVSSVLLALVLIGRAAFVFPLSFLSNLTKKSQNEKISFRKQVIIWWAGLMRGAVSMALAYNEFTMSGHTVLRFNAIMITSTISVVLVSTMVFGMMTKPLIRYLVPLGPPPKRKNSMANLEESSPKSITVPFLNGNHDSEADTDGNDSQGPSSIRDLLTTPTHTVHRLWRKFDDAVMRPVFGGRGFVPVAPTSPTECNGQQSPQWD* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4980 541 PRINTS Na+/H+ exchanger signature 78 89 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mal3g4980 541 PRINTS Na+/H+ exchanger signature 147 157 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mal3g4980 541 PRINTS Na+/H+ exchanger signature 92 106 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mal3g4980 541 PRINTS Na+/H+ exchanger signature 107 115 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Mal3g4980 541 Gene3D - 139 191 - -
Mal3g4980 541 Pfam Sodium/hydrogen exchanger family 23 436 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mal3g4980 541 PANTHER SODIUM/HYDROGEN EXCHANGER 2 6 536 - -
Mal3g4980 541 MobiDBLite consensus disorder prediction 449 492 - -
Mal3g4980 541 MobiDBLite consensus disorder prediction 452 471 - -
Mal3g4980 541 PANTHER SODIUM/HYDROGEN EXCHANGER 6 536 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4980 Mal-Chr3 129791690 129795433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4980 9 531 Antiporters AT3G05030 75.810 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4980 - - gmx:100789667 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4980 3 129791690 129795433 Mal3g4980 3 129791690 129795433 ECH
Mal3g4980 3 129791690 129795433 Mal1g1382 1 17836996 17841402 PCT