Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4933 ATGCAAGACATTTTCGGATCAGTTCGCCGGTCACTAGTATTCCGTGCTTCACCGGAGAACAACGAAGATCATCATTCAATCGGAGGAGGAGGAGGAGGAGCAACCCTAGTTGATAAGATCGGTTACTGCATCCGTAATTCTAGAGTCTTCTCTAAACCTTCTCCGCCACCGTCTCCGCCTATTCCTCAAATCCGATGGCGCAAAGGCGAGTTGATCGGTTGTGGTGCCTTCGGTCATGTTTACGTTGGAATGAATCTCGATTCTGGAGAGCTTCTTGCTGTTAAACAGGTTTTGATTGCAGCAAGTAGTGCTTCCAAGGAGAAGGCACAGGCTCACGTAAAAGAGCTCGAGGAAGAAGTTAAACTGCTTAAAGATCTTTCACATCCCAACATTGTTAGATATTTGGGTACTGTTAGAGAAGAAGATACCTTAAATATCCTCCTAGAGTTTGTCCCTGGTGGATCCATATCTTCACTCTTGGGGAAGTTTGGAGCTTTTCCTGAGGCTGTCATAAGAACTTACACGAAGCAGATATTGCTTGGACTCGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATTAAGGGGGCCAATATTCTTGTAGATAATAAAGGATGTATAAAACTTGCAGATTTTGGAGCATCCAAACAGGTCGTTGAGCTGGCTACCATGTCCGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCCGAAGTTATTCTCCAGACTGGGCATAGCTTCTCGGCTGACATATGGAGCGTGGGTTGTACAGTGATTGAGATGGCCACTGGGAAGCCTCCTTGGAGCCAACAATACCAACAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACTAAGTCTCATCCACCAATCCCTGATCATCTCTCTTCTGGAGCAAAAGATTTTCTGCTAAAGTGCTTGCAGAAGGAACCAATTTTGAGGCTGTCAGCATCAGAACTACTGCAGCATCCCTTTGTTACCGGAGAAAATATGGATTTGGTTCCTCAGTCATCTACTGCCATGGGAAGTTTTAGAGCCTCTTCACCGTCATCATGTGCTCCAAACGTTGAATCCTTACATTGCTCAACAGAAAATCCCCAGGACTCGGGAAATAATCATTTATGGGGAATGAACAATGATGATGACATGTGTGTGATTGATGACAACGAAGAGTTCTCAGAGTGTGATATCAAATACAAATCATTGATGCCAGATAATATTGAGAGTTTCAACCCAATGTCTGACCCCTCTGATGATTGGGGGTGTAAATATGATGCAAGTCCAGAACTGGAAAATAGAGAAGTTAGTTTGGACACTGATGAAGGTTACATGTCACGTGTTCAACTGGAGTCTAATAAGGAACAAAAAGATTTATCCATTCCATGTGTGCCATCTCTGTCAGAAGAAGATGAGGAGCTCACAGAGGTCAAAATTAGAGCTTTTTTGGATGAGAAGGCTCTTGAACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTTTTCAACAGTTTAAATGCATCTTGTTCTCCCAATGTGATTGATAGCCCAAGTGATGATATGGCCGGTCGAAAATACTTGAAATTACCTCCTAAAAGCAAGTCACCAAGTCGGATACCAAATAGTTCTCCATCTAAAGCAGTTGACAATGCAGGAAGTCCTGGAAGTAATGGCAGGTCCTCATCAACCGTTGGCAATGGATATAGTCATGGTTCACAGGATGTTCCAGCGTCTCCCATTAACGAACGAAAAGGAACGATAGTTGACTCCCAGCAGGAGCCCTTTAGCCCAAGTTTAAGCTTTTCCGAGAGACAGAGGAAGTGGAAAGAAGAGCTCGACCAGGAGCTTGAGAGAAAACGAGAAATGATGCGCCAAGCTAATATGGCGGGGAAGACATCTTCGCCAAAGGATCGAGCTTTACATCGACAGAGAGAGCGGACAAGATTTGCTTCTCCCAGCTAA 1968 0.4426 MQDIFGSVRRSLVFRASPENNEDHHSIGGGGGGATLVDKIGYCIRNSRVFSKPSPPPSPPIPQIRWRKGELIGCGAFGHVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHVKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQILLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATMSGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSSGAKDFLLKCLQKEPILRLSASELLQHPFVTGENMDLVPQSSTAMGSFRASSPSSCAPNVESLHCSTENPQDSGNNHLWGMNNDDDMCVIDDNEEFSECDIKYKSLMPDNIESFNPMSDPSDDWGCKYDASPELENREVSLDTDEGYMSRVQLESNKEQKDLSIPCVPSLSEEDEELTEVKIRAFLDEKALELKKLQTPLYEEFFNSLNASCSPNVIDSPSDDMAGRKYLKLPPKSKSPSRIPNSSPSKAVDNAGSPGSNGRSSSTVGNGYSHGSQDVPASPINERKGTIVDSQQEPFSPSLSFSERQRKWKEELDQELERKREMMRQANMAGKTSSPKDRALHRQRERTRFASPS* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4933 655 MobiDBLite consensus disorder prediction 605 627 - -
Mal3g4933 655 Coils Coil 99 126 - -
Mal3g4933 655 CDD STKc_MAPKKK 65 329 - -
Mal3g4933 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Mal3g4933 655 Gene3D Transferase(Phosphotransferase) domain 1 64 353 - -
Mal3g4933 655 MobiDBLite consensus disorder prediction 586 604 - -
Mal3g4933 655 SMART serkin_6 66 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4933 655 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1 1 616 - -
Mal3g4933 655 Pfam Protein kinase domain 67 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4933 655 Coils Coil 607 631 - -
Mal3g4933 655 MobiDBLite consensus disorder prediction 537 578 - -
Mal3g4933 655 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 616 - -
Mal3g4933 655 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Mal3g4933 655 MobiDBLite consensus disorder prediction 511 655 - -
Mal3g4933 655 ProSiteProfiles Protein kinase domain profile. 66 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4933 655 MobiDBLite consensus disorder prediction 637 655 - -
Mal3g4933 655 SUPERFAMILY Protein kinase-like (PK-like) 65 362 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4933 Mal-Chr3 129398441 129403773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4933 1 654 MAP Kinase Kinase Kinase AT1G54960 56.571 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mal3g4933 Pkinase 2.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4933 K20606 - gmx:100807537 1008.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4933 3 129398441 129403773 Mal3g4933 3 129398441 129403773 ECH