Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4896 ATGAGTCGAGGAAGTGCAGCTGGTGCCAAGGGTAAGAAGAAGGGAGCAACCTTCACCATTGACTGTGCCAAGCCTGTGGAAGACAAGATCATGGACATTGCTTCTCTCGAGAAGTTTCTTCAAGAGAGGATTAAGGTCGGTGGCAAAGCTGGTGCTCTCGGTGATTCTGTCACCGTTACCCGTGACAAGTCCAAGATCACTGTTACCTCTGACAGTAACTTTTCCAAGCGATACTTGAAGTATTTGACAAAGAAGTACTTGAAGAAACACAATGTAAGAGACTGGCTCAGAGTGATTGCTTCAAACAAAGATAGAAGTATCTATGAGCTCAGGTACTTCAACATTGCTGAGAACGAAGGAGAGGAAGAAGATTAA 375 0.4453 MSRGSAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4896 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Mal3g4896 124 Gene3D - 5 124 IPR038526 -
Mal3g4896 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Mal3g4896 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4896 Mal-Chr3 129033566 129034833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4896 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.903 1.85e-68 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4896 K02891 - jre:109012705 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4896 3 129033566 129034833 Mal1g1464 1 18916697 18917949 PCT