Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4877 ATGGGGGACTCTCGGAGGAATAAGAGAATAGCCATAATTGGCGTCTCTACCTTCTTATTAGTAGCTATGGTTGTCGCAGTCACAGTTAGCGTAGGCTTCAACAACAAAAGCGGAGGTGGAGAAGAAACTTCAAAAGATTCACACGTAGCTTCATCAGTGAAAGCCGTCAAAGCCCTTTGCGCACCGACAGATTACAAAAAGGAATGTGAGGAAAGTCTCACATCACAAGCTGGAAATATAACTGACCCAAGAGAACTCATCAAAATCGCTTTCAACATAACCATCACAAAAATCAGTAAGGGACTTGAAAAAACTCAACTCCTTCAAGAGGCTGAAAAAGATGCAAAAACTAAACAAGCACTTGATACATGTAAACAACTCATGCATCTTTCCGTCGAGGAATTCCAAAGGTCACTAGTAAGGTTCACTAACTTTGACCTTAATAGCCTCGACAGAGTCCTCACGAGTTTGAAAGTATGGTTAAGTGGTGCCATCACATACCAAGAAACTTGTTTGGATGCTTTTGAGAATACTACAAGCGATGCTGGTCGTAAAATGCAAGAGGTTTTGCAAACTGCTATGCATATGAGTAGTAATGGTCTTTCCATTATTAACCAACTTTCCCAAACATTCTCAGAGATGAAACCTGCGGGTCGTCGTCTTTTGATGGAAAATCTTCCTGAGTGGATTGACGACCGTATTGGTGTTAGGAAACTTCTTAAAATGACCGGAAGGAAACTTCAGGCTCATGTTGTTGTTGCTAAGGATGGATCTGGAAATTTCTCCTCAATCAATGAGGCTCTTAAGCATGTTCCCAAGAAAAACTTGAAGCCATTTGTTATTTACATCAAGGAGGGTGTTTATAAAGAGTATGTTGAAATTACTAGAAGCATGACTCATGTTGTTTTCATTGGTGATGGTGGTAGAAAGTCACGCATTACTGGCAACAAAAACTTCATTGATGGAGTTGGTACCTACAAAACCGCCACCGTTGCTGTTCTTGGAGATTTCTTTGTTGGCATTGGTATTGGTTTTGAAAACTCTGCTGGAGCAGCAAAGCATCAAGCAGTTGCCTTGAGAGTCCAATCTGACAGATCAATCTTCTACAAATGCAGAATGGATGGTTACCAAGACACACTTTACGCTCACACCATGCGTCAATTCTACCGTGATTGTGTTATCTCAGGTACCATTGACTTCGTCTTTGGTGATGCAGTAGCTGTTCTCCAAAACTGCACTTTCATCGTCCGAAAGCCATTGGAAAACCAACAATGCATTGTGACTGCACAAGGTAGGAAGGAAAATAACCAACCATCAGGATTAATCATCCAAGGAAGTTCAATTGTGGCAGATCCGCAATACTATCCAGTTAGATTTGAGAACAAAGCTTACTTGGCTCGTCCATGGAAGAATTACTCAAGAACTATCTTTATGGATACATATATTGGTGATTTGATCACACCTGATGGTTATATGCCATGGCAAACACAAGAAGGTATCACAGGAACTGACACTTGTTACTATGCTGAGTACAATAACCGTGGTCCTGGTTCTGATATTAAAAAGCGTGTAAAATGGCAAGGTATTAAGACTATTACTTCAGCAGGAGCAGAGAGTTTCTTGCCAATAAAATTTTTCCATGGGGATGATTGGATTAGGGTTACTAAAGTTCCTTATTATCCAGGAGGGGCTAAGACTCCTCCTACAAAACCAGCTCATTGA 1722 0.4082 MGDSRRNKRIAIIGVSTFLLVAMVVAVTVSVGFNNKSGGGEETSKDSHVASSVKAVKALCAPTDYKKECEESLTSQAGNITDPRELIKIAFNITITKISKGLEKTQLLQEAEKDAKTKQALDTCKQLMHLSVEEFQRSLVRFTNFDLNSLDRVLTSLKVWLSGAITYQETCLDAFENTTSDAGRKMQEVLQTAMHMSSNGLSIINQLSQTFSEMKPAGRRLLMENLPEWIDDRIGVRKLLKMTGRKLQAHVVVAKDGSGNFSSINEALKHVPKKNLKPFVIYIKEGVYKEYVEITRSMTHVVFIGDGGRKSRITGNKNFIDGVGTYKTATVAVLGDFFVGIGIGFENSAGAAKHQAVALRVQSDRSIFYKCRMDGYQDTLYAHTMRQFYRDCVISGTIDFVFGDAVAVLQNCTFIVRKPLENQQCIVTAQGRKENNQPSGLIIQGSSIVADPQYYPVRFENKAYLARPWKNYSRTIFMDTYIGDLITPDGYMPWQTQEGITGTDTCYYAEYNNRGPGSDIKKRVKWQGIKTITSAGAESFLPIKFFHGDDWIRVTKVPYYPGGAKTPPTKPAH* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4877 573 Pfam Plant invertase/pectin methylesterase inhibitor 55 203 IPR006501 GO:0004857
Mal3g4877 573 PANTHER PECTINESTERASE 10 564 - -
Mal3g4877 573 PANTHER PECTINESTERASE 10 564 - -
Mal3g4877 573 CDD PMEI-like_3 58 208 - -
Mal3g4877 573 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Mal3g4877 573 Gene3D - 244 563 IPR012334 -
Mal3g4877 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 209 IPR035513 -
Mal3g4877 573 SUPERFAMILY Pectin lyase-like 248 561 IPR011050 -
Mal3g4877 573 Pfam Pectinesterase 250 549 IPR000070 GO:0030599|GO:0042545
Mal3g4877 573 SMART PMEI_2 51 203 IPR006501 GO:0004857
Mal3g4877 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 208 IPR035513 -
Mal3g4877 573 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 207 IPR006501 GO:0004857
Mal3g4877 573 ProSitePatterns Pectinesterase signature 1. 275 294 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4877 Mal-Chr3 128828977 128831204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4877 3 572 Carbohydrate Esterase AT3G05610 48.797 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4877 K01051 - gmx:100801686 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4877 3 128828977 128831204 Mal1g1470 1 19044329 19046319 PCT