Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4876 ATGGCATTACTTGTAAATTTCCTTTTCATTCTCATGCTTTTTCCATCCTTTGATCAGGTTCTCTCATTCCCTGATGAATTTCCCTCAGAAATCCAAACTCAAGACATGCAAGCCTTGATTGCGCAAGCCTGCATGGATATTGAAAACCAAAACTCATGCCTCACAAACATTCATAATGAGCTAACCAAAACAGGCCCTCCAAGTCCAACTTCTGTCATTAATGCTGCACTCAGAACCACAATCAATGAAGCCATAGGTGCCATTAACAACATGACAAAGATCAGTACTTTTTCTGTTAATAACCGCGAGCAACTTGCCATAGAAGATTGCAAGGAGCTCATTGACTTCTCTGTGTCAGAGCTTGCATGGTCATTAGGTGAGATGAAGAGAATTCGAGCCGGCGACAGAACCGCGCAATACGAGGGAAACCTCGAAGCTTGGCTAAGTGCGGCGCTTAGTAACCAAGACACTTGCATTGAAGGCTTTGAAGGCACTGATAGACGTCTTGAGAGTTACATTAGTGGAAGCTTAACACAAGTAACACAGCTCATCAGTAATGTTCTGTCTTTGTACACCCAGCTTAATCGCTTACCCTTTAGGCCTCCAAGGAACACTACTACCCTGCATGAAACAAGTACTGATGAAAGCTGGGAGTTTCCTGAATGGATGACCGAGGCTGATCAAGAGCTCCTTAAATCTAAGCCGCGTGGTAGGGTCGCAGATGCGGTTGTTGCATTGGATGGGAGCGGTCAGTACCGTACAATTAACGAAGCTGTTAATGCAGCTCCAAGTCATAGCAATAGGAGACATGTTATCTACGTGAAGAAGGGACTATACAAGGAGAATGTTGATATGAAGAAGAAGATGACCAACATCATGATGGTTGGTGATGGTATTGGCCAAACCATTGTCACAAGCAATCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACATTTGCCGTATCCGGGAAGGGTTTCATAGCAAGGGACATGACATTCCGGAACACTGCTGGACCAGTAAACCATCAAGCCGTGGCACTGCGTGTCGATTCAGACCAATCTGCATTCTTTAGGTGTAGCATAGAAGGAAACCAAGACACACTTTACGCACACTCGCTGAGACAGTTCTACCGTGAATGTGAAATCTATGGAACCATAGATTTCATTTTTGGCAATGGAGCTGCCGTGCTACAAAATTGCAAGATATACACAAGAGTTCCACTTCCATTACAAAAGGTTACAATCACAGCTCAAGGTAGGAAAAGTCCACATCAAAGCACAGGGTTTACAATCCAAGATAGTTATGTTTTGGCCTCACAACCTACATATTTGGGGAGGCCTTGGAAGGAATATTCTAGAACAGTTTACATTAACACATACATGAGTAGTATGGTTCAACCTCGAGGGTGGCTTGAATGGCTCGGTAACTTTGCATTGGACACTTTGTGGTACGGTGAGTACAGGAATTATGGACCTGGTTCATCGCTCGCAGGTAGGGTCAAATGGCCTGGTTATCATATCATTAAAGACGCTTCTGCGGCTGGTTATTTTACAGTTCAGCGGTTTCTTAACGGCGGTTCATGGTTGCCTAGAACAGGTGTTAAGTTCACAGCAGGGTTGAGCAATTGA 1638 0.4432 MALLVNFLFILMLFPSFDQVLSFPDEFPSEIQTQDMQALIAQACMDIENQNSCLTNIHNELTKTGPPSPTSVINAALRTTINEAIGAINNMTKISTFSVNNREQLAIEDCKELIDFSVSELAWSLGEMKRIRAGDRTAQYEGNLEAWLSAALSNQDTCIEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLNRLPFRPPRNTTTLHETSTDESWEFPEWMTEADQELLKSKPRGRVADAVVALDGSGQYRTINEAVNAAPSHSNRRHVIYVKKGLYKENVDMKKKMTNIMMVGDGIGQTIVTSNRNFMQGWTTFRTATFAVSGKGFIARDMTFRNTAGPVNHQAVALRVDSDQSAFFRCSIEGNQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYVLASQPTYLGRPWKEYSRTVYINTYMSSMVQPRGWLEWLGNFALDTLWYGEYRNYGPGSSLAGRVKWPGYHIIKDASAAGYFTVQRFLNGGSWLPRTGVKFTAGLSN* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4876 545 CDD PMEI-like_4 53 195 - -
Mal3g4876 545 Pfam Plant invertase/pectin methylesterase inhibitor 39 190 IPR006501 GO:0004857
Mal3g4876 545 SMART PMEI_2 35 190 IPR006501 GO:0004857
Mal3g4876 545 Gene3D - 238 543 IPR012334 -
Mal3g4876 545 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 7 543 - -
Mal3g4876 545 PANTHER PECTINESTERASE 7 543 - -
Mal3g4876 545 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Mal3g4876 545 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 194 IPR006501 GO:0004857
Mal3g4876 545 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 194 IPR035513 -
Mal3g4876 545 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 195 IPR035513 -
Mal3g4876 545 SUPERFAMILY Pectin lyase-like 241 542 IPR011050 -
Mal3g4876 545 Pfam Pectinesterase 241 528 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4876 Mal-Chr3 128825901 128827801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4876 8 545 Carbohydrate Esterase AT3G05620 61.749 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4876 K01051 - gmx:100810565 941.799