Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4858 ATGGATCGAGAAGGAGGAGGAGGATCCAACGGTGGTGGATCTTCTTGCTATTACTCTGTTCTTGGAATTCGTAGTGACGCCTCCTCCTCTGATATTCGCACTGCTTACCGTAAACTCGCTATGAGATGGCACCCTGATAAATTCGCTCGGAACCCTACAACTGCCGGAGAAGCCAAAAGAAGGTTTCAGCAAATCCAAGAAGCATACTCAGTTCTATCTGATGAGTCTAAAAGATCAATGTACGATGCTGGGCTCTACGATCCTCTTGAAGAAGAAGACCAAGAATTTTGTGATTTTATGAGCGAAATGATCTCAATGATGAATAATGTCAAAGATGAGGGGGACAGTTTGGAAGATCTACAAAGGATGTTTGTTGAGATGGTTGGTGGAGATGGTATGAGCTTTGATTTGAACCAAGATCAGACGGTTGGGAAGAGAGGACGCTCAAGTGGATCAAGAGGCAACGCAGCCAAGCGCAGCAATCATTGCCGCTAG 495 0.4545 MDREGGGGSNGGGSSCYYSVLGIRSDASSSDIRTAYRKLAMRWHPDKFARNPTTAGEAKRRFQQIQEAYSVLSDESKRSMYDAGLYDPLEEEDQEFCDFMSEMISMMNNVKDEGDSLEDLQRMFVEMVGGDGMSFDLNQDQTVGKRGRSSGSRGNAAKRSNHCR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4858 164 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Mal3g4858 164 Gene3D DnaJ domain 9 106 IPR036869 -
Mal3g4858 164 PANTHER PUTATIVE, EXPRESSED-RELATED 14 152 - -
Mal3g4858 164 CDD DnaJ 16 74 IPR001623 -
Mal3g4858 164 ProSiteProfiles dnaJ domain profile. 16 85 IPR001623 -
Mal3g4858 164 MobiDBLite consensus disorder prediction 135 164 - -
Mal3g4858 164 SUPERFAMILY Chaperone J-domain 15 88 IPR036869 -
Mal3g4858 164 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Mal3g4858 164 MobiDBLite consensus disorder prediction 135 157 - -
Mal3g4858 164 PRINTS DnaJ domain signature 57 77 IPR001623 -
Mal3g4858 164 PRINTS DnaJ domain signature 18 36 IPR001623 -
Mal3g4858 164 PRINTS DnaJ domain signature 36 51 IPR001623 -
Mal3g4858 164 SMART dnaj_3 15 77 IPR001623 -
Mal3g4858 164 PANTHER PUTATIVE, EXPRESSED-RELATED 14 152 - -
Mal3g4858 164 Pfam DnaJ domain 17 82 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4858 Mal-Chr3 128634159 128635382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4858 16 83 C2H2 Transcription Factor Family AT1G74250 43.478 3.17e-14 67.4