Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4857 ATGCTGGCACATTATGTATTGTCTGACGATGCTGCTGAGCAATTGAAAGGAACTTCTCAGATTGGGAAGCTATTATCTCGATGGCTCGACCCTCCATTTGAGGAGGTGGTTCGGACAGGTGTTGTCCCAAAATTTGTCGAGTTTTTGTCAAGGGATGATAGACCCCAACTACAAGCTACACGGAATCTGACCAGCATCATTTGGGCAATGTCTGAGCAGACAAGGGTTGTAATTGAATTTGGTGCTATTCCTAAGTTAGTTCGGCTTATTAGATCTCCTACTAGTAGTAATGATCTCAAAAAACATGCAGCACGGACTTTAACGAATATTTCGGCGGGTAGTTCCTTGAGTGAAAGAGATATTGTTCTTGATCACGGAGCGATTTTGCCATTATTGTCTCTATTGTCAATTTCAAATAGACAACCACTCTTGTTCTTGGCTTCATGTATATTATATAACTTGTGCTGCAAGCCACTTCCAACACCTATTGAAAAGATACTTCCTGTATTGCCTATCCTTAGGAATCTCATTGTGATACCGGATGAAAAAATTGTTTCAAATGTATGTTGGACTCTCTCCTGTCTTTCTGATGACGATGATGAAATGGTCAAAGCTATCGTCGAAGCAGATTTTGTCCCGCGACTTGTCGCGCTACTCATGCATCATTCATCAAATGCTCTTGAGCCTGCTCTTAGGACTCTTGGAAATATTGCTAAAACAGACCATACTCAGGTAGAAAAGATCAAAGCAACATTATCATTCATCACCTAG 771 0.4099 MLAHYVLSDDAAEQLKGTSQIGKLLSRWLDPPFEEVVRTGVVPKFVEFLSRDDRPQLQATRNLTSIIWAMSEQTRVVIEFGAIPKLVRLIRSPTSSNDLKKHAARTLTNISAGSSLSERDIVLDHGAILPLLSLLSISNRQPLLFLASCILYNLCCKPLPTPIEKILPVLPILRNLIVIPDEKIVSNVCWTLSCLSDDDDEMVKAIVEADFVPRLVALLMHHSSNALEPALRTLGNIAKTDHTQVEKIKATLSFIT* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4857 256 PANTHER IMPORTIN ALPHA 3 248 - -
Mal3g4857 256 Gene3D - 1 253 IPR011989 -
Mal3g4857 256 SMART arm_5 70 112 IPR000225 GO:0005515
Mal3g4857 256 SMART arm_5 114 156 IPR000225 GO:0005515
Mal3g4857 256 SMART arm_5 199 239 IPR000225 GO:0005515
Mal3g4857 256 SMART arm_5 29 68 IPR000225 GO:0005515
Mal3g4857 256 SMART arm_5 157 197 IPR000225 GO:0005515
Mal3g4857 256 PANTHER IMPORTIN SUBUNIT ALPHA-4 3 248 - -
Mal3g4857 256 SUPERFAMILY ARM repeat 3 246 IPR016024 -
Mal3g4857 256 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 111 IPR000225 GO:0005515
Mal3g4857 256 Pfam Armadillo/beta-catenin-like repeat 71 112 IPR000225 GO:0005515
Mal3g4857 256 Pfam Armadillo/beta-catenin-like repeat 199 238 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4857 Mal-Chr3 128627858 128629126 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4857 36 223 U-box Gene Family AT2G28830 26.178 2.35e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4857 K15042 - csin:114288092 204.142