Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4855 ATGTCTCTGCAATCTGATCCTTCTTCATCTCAGAGGAAGAAAGTGCATAAGAATAATACCGTACTTGAGGTGGAAGATGGTCTTCGTCGTCAGAGAGATGCCAGCAGCTTACGCAAGAATAATAAATTACTCCAACAATCTTCTTTTTCCAAGAAGCGAAAGCTCTTTCGTGCCGATACTTCTTCTCCAATGCCCACTGAAGATCCTCCTTTCCCCATCTATATCTCTACCCAAGACTATGATGATATAGTGGCCAAGGTGCAAGCCATTCCTAAACTGACACTGGCCTTATTGTCCGACGACTCTGCTTCACAACTTGAAGCAACTATTGAGTTTGGAAAGTTACTATCAGGGGGCTACATCCCTCTAATTGATAAGGTGAAGCGGGCAGGTGTTGTCCCTCGGTTTGTGCAGTTTTTGAAAAGGGATGATATGCCCCAACTGCAGTCCATGGCAGCATGGACGCTGACCAATATCGCAGCGGGGTTGTCTGAGCATACAAACATTGTGATTGAACATGGTGCTGTTCCTCTGCTTGTAAAGCTTCTGACCTCTGGTAGTGATGATTGCAAAGAACAGGCATTATGGGCATTAGGTAATATTGCTGGCAATTCCCTGACTGCAAGGGATCTTGTTTTAACTCATGGTGGACTTCTTCCATTATTGTCTCTGATGTGGAATCCTTCTACAACAAAAAAACCTACATGGAGCATTGCTACATGGGCTTTTTTCAACATTACTCGTGGAAGGCCTCTTCTAACTCTTGAGGATCAGATGCTACCAGCATTGCCTGGCCTTAGGGAACTCTTATTGATGCCTGAGGAAGAAATTATACTATATGCATGCCATATTCTCTCCTGGCTTACTCAGAAAGGTTCAAACGAAATGGTCCAAGCTGTCGTTGAGGCAAAAGTTTGCCCACGACTTGTAGAGTTACTACTGATTCCGGAGTCAAAAGTTGTTGTGCCTACTCTGGAGATTCTAGGAGATATTTCTTCTGGTGATGATGCTCAGACTCAGGTTCTAATTACCAGTGGAGCTCTCCGTTGTCTTAAATTTCTTCTTACACAAAGTGATAAAATCATCCTCGAAGAAGCTTGTTCGGTAATTTCGAATATCGCAGGTGGGAATAATGATCAAAAACAGGATGTCATTGATGCCGATATTATTAGTTCTCTTGTCCGTCTCACAAAGGCTGACTTCGCCATTAGGAAGGAGGCTGTGTGGGCTATTTCGAATGTCACTCACGGAACTCTTGAGCAGATTCAGTACTTGGCGTGTAATGAGTGTATTGAGGCACTCTGTGATCAACTGACCAGCACAGACGCGACTGTTCTGAAACTTTGTCTGACTGGGCTGAAACACATTTTAACGGCAGGAGAAATTAACAAGGATAAGGGATTATATAAAGGGATCAATGTTTATGCTCAAATGATTGAAGAGTGTGCAGGATTGGATAAGATTGCAAGATTGCAAAGCTATGACAACAATGACATTTATAAAAGGGCATTGGAGATTTTGGAGAAATATTTTCCTGAGAACATTGAAGCTATAGGTGAAGAGAACTAG 1569 0.4277 MSLQSDPSSSQRKKVHKNNTVLEVEDGLRRQRDASSLRKNNKLLQQSSFSKKRKLFRADTSSPMPTEDPPFPIYISTQDYDDIVAKVQAIPKLTLALLSDDSASQLEATIEFGKLLSGGYIPLIDKVKRAGVVPRFVQFLKRDDMPQLQSMAAWTLTNIAAGLSEHTNIVIEHGAVPLLVKLLTSGSDDCKEQALWALGNIAGNSLTARDLVLTHGGLLPLLSLMWNPSTTKKPTWSIATWAFFNITRGRPLLTLEDQMLPALPGLRELLLMPEEEIILYACHILSWLTQKGSNEMVQAVVEAKVCPRLVELLLIPESKVVVPTLEILGDISSGDDAQTQVLITSGALRCLKFLLTQSDKIILEEACSVISNIAGGNNDQKQDVIDADIISSLVRLTKADFAIRKEAVWAISNVTHGTLEQIQYLACNECIEALCDQLTSTDATVLKLCLTGLKHILTAGEINKDKGLYKGINVYAQMIEECAGLDKIARLQSYDNNDIYKRALEILEKYFPENIEAIGEEN* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4855 522 Pfam Armadillo/beta-catenin-like repeat 123 161 IPR000225 GO:0005515
Mal3g4855 522 Pfam Armadillo/beta-catenin-like repeat 165 202 IPR000225 GO:0005515
Mal3g4855 522 Pfam Armadillo/beta-catenin-like repeat 335 374 IPR000225 GO:0005515
Mal3g4855 522 Pfam Armadillo/beta-catenin-like repeat 377 415 IPR000225 GO:0005515
Mal3g4855 522 PIRSF Importin_alpha 2 522 IPR024931 GO:0005737|GO:0006606|GO:0061608
Mal3g4855 522 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 174 216 IPR000225 GO:0005515
Mal3g4855 522 SMART arm_5 335 375 IPR000225 GO:0005515
Mal3g4855 522 SMART arm_5 293 333 IPR000225 GO:0005515
Mal3g4855 522 SMART arm_5 163 203 IPR000225 GO:0005515
Mal3g4855 522 SMART arm_5 418 458 IPR000225 GO:0005515
Mal3g4855 522 SMART arm_5 120 161 IPR000225 GO:0005515
Mal3g4855 522 SMART arm_5 204 248 IPR000225 GO:0005515
Mal3g4855 522 SMART arm_5 377 416 IPR000225 GO:0005515
Mal3g4855 522 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 131 174 IPR000225 GO:0005515
Mal3g4855 522 MobiDBLite consensus disorder prediction 10 37 - -
Mal3g4855 522 PANTHER IMPORTIN SUBUNIT ALPHA-4 6 515 - -
Mal3g4855 522 SUPERFAMILY ARM repeat 10 513 IPR016024 -
Mal3g4855 522 PANTHER IMPORTIN ALPHA 6 515 - -
Mal3g4855 522 Gene3D - 88 511 IPR011989 -
Mal3g4855 522 MobiDBLite consensus disorder prediction 1 71 - -
Mal3g4855 522 Pfam Atypical Arm repeat 473 516 IPR032413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4855 Mal-Chr3 128592899 128597053 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4855 K15042 - egr:104414680 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1493 1 19346576 19351137 Mal3g4855 3 128592899 128597053 ECH
Mal5g4887 5 122219567 122223245 Mal3g4855 3 128592899 128597053 ECH
Mal3g4855 3 128592899 128597053 Mal3g4855 3 128592899 128597053 ECH