Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4846 ATGTCTAACACCAGCAACACCAATGTGGGTGGGGTTGACAACACATTCAGAAGAAAATTCGATCGTGAAGAGTATCTTGAACGTGCTCGTGAGCGTGAGAGACAGGAGGAAGAGAGAGCAAAACCTAAAGGTAAAGGTCCTCCGGTGCAGAGGAAGCCCTTGAAACATAGAGATTATGAAGTAGACCTTGAATCCCGCTTGGGAAAAACTCAGGTTGTAACGCCAGTTGCACCACTAAGCCAACAGGCTGGATATTACTGCTCAGTTTGTGAGTGTGTGGTGAAGGACTCCGCAAACTACTTGGATCATATTAATGGAAAGAAACATCAGAGAGCGTTGGGCATGTCTATGCGAGCTGAACGATCTTCTCTCAAACAGGTTCAGGAACGGTTTGAAAATCTGAAGAAACGGAAAGACCATGGAAGCTTTACAGAGCAAGATTTTGATGAAAGGATTTTAAAACAGCAACAAGAAGAGGAAGAAAGAAAGCGTCTGCGTCGGGAAAAGAAAAAAGAAAAGAAGAAGGAGGCAGTTGAAGAACCTGAAATGGATCCTGACGTTGCTGCCTTGATGGGGTTTGGAGGTTTTCGGTCATCCAACAAAAAGTGA 609 0.445 MSNTSNTNVGGVDNTFRRKFDREEYLERARERERQEEERAKPKGKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRAERSSLKQVQERFENLKKRKDHGSFTEQDFDERILKQQQEEEERKRLRREKKKEKKKEAVEEPEMDPDVAALMGFGGFRSSNKK* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4846 202 Coils Coil 153 180 - -
Mal3g4846 202 MobiDBLite consensus disorder prediction 135 202 - -
Mal3g4846 202 Pfam Zinc-finger of C2H2 type 85 109 - -
Mal3g4846 202 Gene3D Classic Zinc Finger 79 118 - -
Mal3g4846 202 MobiDBLite consensus disorder prediction 1 58 - -
Mal3g4846 202 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Mal3g4846 202 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 3 201 IPR040107 GO:0000398|GO:0005681
Mal3g4846 202 MobiDBLite consensus disorder prediction 15 58 - -
Mal3g4846 202 SUPERFAMILY beta-beta-alpha zinc fingers 80 124 IPR036236 -
Mal3g4846 202 Coils Coil 117 137 - -
Mal3g4846 202 MobiDBLite consensus disorder prediction 135 182 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4846 4 147 C2H2 Transcription Factor Family AT3G05760 80.556 3.39e-83 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal3g4846 zf-C2H2_jaz 1.9e-06 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4846 3 128485183 128488845 Mal3g4846 3 128485183 128488845 ECH