Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4818 ATGGGTTCTAATCTGAAAGCTGAATTATCAAAGAAAACATCTTTTTTTGGTATAAAGGTTTGGGAAATTATTGCAATTGTAGTTGGTTTGTCAATTATAGTTATTCTCACTGTGTTATCAATTTGCCTTACTTCAAGAAAGAAATCTAGAAAAGCTAGGAACAAGATTCCTGTTACTGAGATACCAAATGTGTCAAAAGAAATCAAGGAAGTTAGGGTTGAACAAGTATCAACAAATGGATTTGCGCCTCGTGACGGAATACTTTTAACCATTCATGATAAATCTAGTGACAAGGAATCAGACAAAGTTATGGTTCATTTAGGTTTAGGGAAGAAGGTGAAGAATGGTGATAGTAGTAGTCATTCAGATTCATTTCATCAGTATATGGAGAAAGATGGTGGTGGTGGAGGGTCACATTCGCAATCAGGTGAAGAAGGTAGTTCGGGAACGGTTACTGTGTACAAGCATTCTTCTGCTTCATACCCTATAACAGCTCCTTCGCCTTTATCCGGCCTTCCGGAATTCTCTCACTTAGGTTGGGGTCATTGGTTTACTTTGAGGGATCTTGAACTTGCTACAAACCGTTTCGCCAAAGAAAACGTACTTGGTGAAGGTGGTTATGGAGTTGTTTATAAGGGACAGTTGATTAATGGAAGTCCAGTTGCAGTTAAAAAGATACTCAATAATATTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGTCACGTCAGACACAAAAACTTAGTTCGACTTTTGGGGTTCTGCGTCGAGGGAACTCACAGGATTTTAGTCTATGAGTATGTCAATAATGGAAATTTGGAGCAATGGCTTCATGGAGCTATGCGCCACCATGGCTATCTTACGTGGGAAGCACGCATCAAGATTCTCCTTGGCACTGCCAAAGCGCTTGCGTATTTGCACGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATCAAGTCAAGCAACATATTAATTGACGATGATTTTAATGCTAAGGTTTCTGATTTTGGTCTGGCCAAATTATTGGGTGCTGGGAAGAGTCATGTCACAACCCGAGTTATGGGAACCTTTGGATACGTGGCTCCTGAATATGCAAACACTGGCCTTCTAAATGAGAAGAGTGATGTTTATAGCTTTGGTGTTTTGCTATTGGAAGGAATCACCGGAAGAGATCCAGTTGATTATGGTCGTCCGACAAATGAAGTGAATCTAGTTGATTGGCTGAAGATGATGGTTGGAAACAGGAGATCAGAAGAAGTGGTGGACCCAAACATTGAGGTGAAGCCATCAACCAGAGCTTTAAAAAGGGCTCTCTTAACTGCTTTAAGATGTGTAGATCCAGATTCTGAGAAAAGGCCCAAGATGAGCCAAGTTGTACGTATGCTTGAGTCAGAGGAATACCCTTTAGCAAGAGAGGATCGAAGGCACAGGAGAAGAAATCAAGGGGGTAGTGCAGAAATTGACTCCCAGAGGGAATTTTCCGACACAGACAGGAGTGAGATTCAGAGTTCTAGAGAAGAGAGCAGAGGGTAA 1548 0.4128 MGSNLKAELSKKTSFFGIKVWEIIAIVVGLSIIVILTVLSICLTSRKKSRKARNKIPVTEIPNVSKEIKEVRVEQVSTNGFAPRDGILLTIHDKSSDKESDKVMVHLGLGKKVKNGDSSSHSDSFHQYMEKDGGGGGSHSQSGEEGSSGTVTVYKHSSASYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFAKENVLGEGGYGVVYKGQLINGSPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGFCVEGTHRILVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPTNEVNLVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPLAREDRRHRRRNQGGSAEIDSQREFSDTDRSEIQSSREESRG* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4818 515 Pfam Protein kinase domain 197 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4818 515 SUPERFAMILY Protein kinase-like (PK-like) 180 473 IPR011009 -
Mal3g4818 515 ProSiteProfiles Protein kinase domain profile. 196 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4818 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 318 330 IPR008271 GO:0004672|GO:0006468
Mal3g4818 515 MobiDBLite consensus disorder prediction 468 515 - -
Mal3g4818 515 ProSitePatterns Protein kinases ATP-binding region signature. 202 225 IPR017441 GO:0005524
Mal3g4818 515 CDD STKc_IRAK 202 468 - -
Mal3g4818 515 PANTHER OS01G0323000 PROTEIN 3 514 - -
Mal3g4818 515 Gene3D Phosphorylase Kinase; domain 1 178 271 - -
Mal3g4818 515 MobiDBLite consensus disorder prediction 114 151 - -
Mal3g4818 515 SMART serkin_6 196 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4818 515 Gene3D Transferase(Phosphotransferase) domain 1 272 484 - -
Mal3g4818 515 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4818 Mal-Chr3 128195246 128199895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4818 134 470 Trihelix Transcription Factor Family AT1G70460 46.784 2.84e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mal3g4818 Pkinase 5.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4818 - - gmx:100787014 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4818 3 128195246 128199895 Mal3g4818 3 128195246 128199895 ECH
Mal3g4818 3 128195246 128199895 Mal8g1455 8 27893372 27895656 PCT