Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4813 ATGAGTAATGATTCAAAAGATGATGAGGAATGGGTCTCAAACATAGTAATCATGGGTGTCTCCATGCTGCTTCTTGCATTGGTAACCATTGCTGTTTTTGTCAACGTAGGTGGCTCTAAAAACGTAGTTGCTATGGAGAACCGTAACTCTGTCTGTGCAAAAACAGAGGCACCGGAAAGTTGTCTGCGTGTCTTAAAACACATAGGTGAAACAGCAACGGTTTTGGATTATGTAAAAGCTTCTCTTAATGCAACCCTTGAAGAATTCTTGGTAGTTAACACACCAAAACCTTATCTTGAAAGAATCCTAACTCCTCTGCAGGCACAATCATATAGAGATTGTTTGGAATTGTTGAATATGGGAAAAGATGAACTAGAATTTTTGTATATGATGGGAAATTTGTCTATTCAAGATATATACAACCCACGTTGTGTTATGAATAGCCTAAGTGCTATAATTTCATATCAACAAACTTGTGTTAATGAATTAGTGAGAACAAATAGTTATGAGATTTTGGGGTATTCTTTGAAAATACCAATTCTTCTTACAAGGATTACATTAGCCATAGTCCATAATTCTGTCGAGATGCCGAACATCGATGATCGACAACTTGAAGGGTCTAAAAAATTGCTCCCAGGAGCTGACCACAAACTTATGGAGGTTCAACAGTCAAGAATAGTTGTGGCTCAAGATGGAAGTGGCCACTTCTCAACCATAACTGAGTCACTAGTTTATTGTGCAAATAATAGAAATAATTCATGTGTTATTTATGTGATGAAAGGTAAATATGAGGAGAGAGTGGTGGTTCCTAAGAATTTACACCAAGTTCTCATGTATGGTGATGGACCTATGAATACCACTGTCACTGGAATCAACTCAATAGACCCCAAGAACGTTACAACCCCCTTTCAGTCAGCTACTTTTGTGGTAAAGGGGAAAGGATTCATCTGTAAAGATATGGGTTTCATAGCTCCAGCTAATATACCAGGAGCATCAGCACTCGTTGTACTTGCTGATTATGCAGCATTCTTCAACTGCAAAATTGACGGCGAAGAAGGAAGCTTATACGCGGTTGCGCAGCGCCAATTCTACAGAGACTGTGAAATTCGTGGTAGTGTAGACATCATCAAAGGAGACTCAACAACATTAATTCAAAACTCACGAATAATTGTGAAGCCTCGAAATTCTTCTAACTTAGTTCTAAGGAAAAATGTGGTGAGTGCTCAATCAAGATTAGACAAATATGAGAAAACAGGACTTGTGATCCAAAACTGCACCATCATAGCAGAACAATGCGAAATCGATGATAATAGTCTTGTTGGTTCGACTTGTTTGGGAACTCCGCGTAACGAATATTCAAGAACAATCATAATGGAATCATTTCTTGGTGATGTTATACGTTCAAAAGGTTGGTGTAAATTGAGTGATAATTATGGAATTGATACAGCAACGTTTAGAGAGTATAATAATAGAGGACCTGGTGCAAGAAATGATAAGAGGGTTCATTGGGAGAGTTATAAAACAATTTCTCAGAATCAGAAAAGTAAAATCATGACTTTTACAGCTGCTGAGTTTATTCAAGCAAACCAATGGTTGAAAAATACAGGCATTCCATATGAATCTGGACTTTTCTTTCCTAAGTAG 1644 0.3759 MSNDSKDDEEWVSNIVIMGVSMLLLALVTIAVFVNVGGSKNVVAMENRNSVCAKTEAPESCLRVLKHIGETATVLDYVKASLNATLEEFLVVNTPKPYLERILTPLQAQSYRDCLELLNMGKDELEFLYMMGNLSIQDIYNPRCVMNSLSAIISYQQTCVNELVRTNSYEILGYSLKIPILLTRITLAIVHNSVEMPNIDDRQLEGSKKLLPGADHKLMEVQQSRIVVAQDGSGHFSTITESLVYCANNRNNSCVIYVMKGKYEERVVVPKNLHQVLMYGDGPMNTTVTGINSIDPKNVTTPFQSATFVVKGKGFICKDMGFIAPANIPGASALVVLADYAAFFNCKIDGEEGSLYAVAQRQFYRDCEIRGSVDIIKGDSTTLIQNSRIIVKPRNSSNLVLRKNVVSAQSRLDKYEKTGLVIQNCTIIAEQCEIDDNSLVGSTCLGTPRNEYSRTIIMESFLGDVIRSKGWCKLSDNYGIDTATFREYNNRGPGARNDKRVHWESYKTISQNQKSKIMTFTAAEFIQANQWLKNTGIPYESGLFFPK* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4813 547 SUPERFAMILY Pectin lyase-like 224 541 IPR011050 -
Mal3g4813 547 CDD PMEI-like_3 50 192 - -
Mal3g4813 547 Pfam Plant invertase/pectin methylesterase inhibitor 50 164 IPR006501 GO:0004857
Mal3g4813 547 Gene3D - 223 545 IPR012334 -
Mal3g4813 547 SMART PMEI_2 43 189 IPR006501 GO:0004857
Mal3g4813 547 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7 544 - -
Mal3g4813 547 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 192 IPR035513 -
Mal3g4813 547 Pfam Pectinesterase 226 529 IPR000070 GO:0030599|GO:0042545
Mal3g4813 547 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 192 IPR035513 -
Mal3g4813 547 PANTHER PECTINESTERASE 7 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4813 Mal-Chr3 128124331 128126155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4813 1 544 Carbohydrate Esterase AT3G05610 32.027 8.04e-78 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4813 K01051 - gmx:102665007 650.973