Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4809 ATGGATTACCGATGGACAAAAGGTAGTAGTAAGCATGAATCTAGTAGCCGAAGGAACCAATTCAAAAAGGATCAGGCATATGATGAGGACTCTGATTTTCGTTTGCCCAGAAATCAAAGGCCAACTGAAAATGTTGATCTCGATAATGTTGAACAAGCTTCTCTTGACACACACATAACTTCATCTAATATTGGTTTTAAGCTTCTTCAAAAAATGGGTTGGAAAGGAAAGGGTCTTGGCAAAAATGAACAAGGAATAGTTGAGCCAATAAAATCTGGAATTAGAGATCCAAGACTGGGGGTTGGTAAACAAGAAGAAGATGACTTTTTCACTGCAGAAGAAAATGTCCAGCGAAAAAAACTCGATATTGAGTTGGAGGAGACAGAGGAGAATGTGAGGAAGCGAGAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACTGAGGTGAAAGAAATCCGAAAGGTGTTTTATTGTGAACTCTGCAACAAGCAATACAAATTGGCAATGGAGTTCGAAGCACACTTGAGCTCTTACGATCACAATCACAGGAAGCGTTTCAAAGAAATGAAGGAAATGCATGGTAGCAGTAGCCGGGATGATAGGCAAAAGCGAGAACAGCAGCGTCAAGAGAGAGAATTGGCCAAGTTTGCCCAAATTGCGGATGCTCAAAAGCAGCAACGGCTTCAACTGCAACAAGAGTCTGGATCAGCACCAGTTTCAGTTTCCTCCGAATCTAAGACTGCTACTGCACTTACAGATCAGGAGCAGCGAAATACTTTGAAGTTTGGGTTTTCTGCTAAAGGAACGGCTTCCAAGAGCACGTTTGGTGTCAGGAAGCAAAATGTTCCGAAGAAGCCAAATGTTCCAGTGGCCTCCATATTTGGCAATGATAGCGATGAAGAGTAA 906 0.4205 MDYRWTKGSSKHESSSRRNQFKKDQAYDEDSDFRLPRNQRPTENVDLDNVEQASLDTHITSSNIGFKLLQKMGWKGKGLGKNEQGIVEPIKSGIRDPRLGVGKQEEDDFFTAEENVQRKKLDIELEETEENVRKREVLAEREQKIQTEVKEIRKVFYCELCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKEMHGSSSRDDRQKREQQRQERELAKFAQIADAQKQQRLQLQQESGSAPVSVSSESKTATALTDQEQRNTLKFGFSAKGTASKSTFGVRKQNVPKKPNVPVASIFGNDSDEE* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4809 301 SMART G-patch_5 59 104 IPR000467 GO:0003676
Mal3g4809 301 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 301 - -
Mal3g4809 301 MobiDBLite consensus disorder prediction 189 217 - -
Mal3g4809 301 Pfam Zinc-finger double-stranded RNA-binding 156 183 IPR022755 -
Mal3g4809 301 MobiDBLite consensus disorder prediction 269 301 - -
Mal3g4809 301 SUPERFAMILY beta-beta-alpha zinc fingers 137 191 IPR036236 -
Mal3g4809 301 Coils Coil 111 138 - -
Mal3g4809 301 MobiDBLite consensus disorder prediction 1 41 - -
Mal3g4809 301 MobiDBLite consensus disorder prediction 222 257 - -
Mal3g4809 301 Pfam G-patch domain 62 102 IPR000467 GO:0003676
Mal3g4809 301 ProSitePatterns Zinc finger C2H2 type domain signature. 158 180 IPR013087 -
Mal3g4809 301 MobiDBLite consensus disorder prediction 1 49 - -
Mal3g4809 301 MobiDBLite consensus disorder prediction 189 257 - -
Mal3g4809 301 ProSiteProfiles G-patch domain profile. 61 106 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4809 Mal-Chr3 128089616 128093311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4809 10 301 C2H2 Transcription Factor Family AT5G26610 65.333 1.18e-121 349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4809 3 128089616 128093311 Mal3g4809 3 128089616 128093311 ECH