Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4807 ATGGGAACAGCTACCTGCGTCGATATTATTCTTGCCATCATCCTTCCACCTCTTGGTGTCTTCCTTAAGTTTGGCTGCAACGTGGAGTTCTGGATCTGTTTGATTCTCACCATTTTGGGCTACCTTCCTGGAATTCTCTATGCTATCTATGTTATCACTAAGTGA 165 0.4364 MGTATCVDIILAIILPPLGVFLKFGCNVEFWICLILTILGYLPGILYAIYVITK* 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4807 54 PANTHER HYDROPHOBIC PROTEIN RCI2B 1 54 - -
Mal3g4807 54 Pfam Proteolipid membrane potential modulator 6 52 IPR000612 GO:0016021
Mal3g4807 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 54 IPR000612 GO:0016021
Mal3g4807 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4807 Mal-Chr3 128062653 128062916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4807 1 54 RCI2 Gene Family AT3G05890 85.185 6.28e-28 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4807 - - aof:109840179 106.301