Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4798 ATGGCTAAACTTTTCTGGGTTGGCATTGCAATAGGACTTTTTTTCACCAACTTTGTTTATGGTCAACAACATCATTTCTTCAATGAAACTGAAGAACTCTTTCTGTTAGAGGCTCATGAACATGCATCCTATTCCTCATCCTTTCTACAGGGTAATGGAAATCCTCTGCTTGTAGGACTCACCCTTATCCACAATGCAGCTGCTAAAGGAGCAGTGTGCTTGGATGGAACATTACCCGGTTACCATTTGCATCGTGGATATGGATCAGGAACAAACAGCTGGCTTGTTAATTTAGAGGGAGGTGGATGGTGTAACAATGTTAGAACATGTGTTTATCGCAAAAAAACACGGCGCGGATCATCATTATTCATGGAAAAGGAGATACCATTCACCGGAATACTTAGTAATAAACCTGAAGAAAATCCAGATTTTTTCAATTGGAATAGAGTAAAGCTTCGTTATTGTGATGGTGGATCATTTACTGGAGATGGTGAAGATCAGGATGCAGAACTGCAATTCAGAGGACAACGTATTTGGGCAGCTGCAATGGAGGATTTGATGTCAAAGGGAATGCATTTTGCTAACCAGGCTCTTCTTTCCGGATGTTCTGCGGGTGGCCTAGCTACTATTATACACTGCGATGAATTTCGAGGTCTCTTTCCAAGGACTACTAAAGTGAAATGTCTAAGCGATGCAGGGTTGTTTCTTGATTCGATCGATATATCTGGCGAGCGTACCCTCCGGAATATGTACAATGGTGTTGTAGGGTTGCAGGACGCACAGAAGAATCTGCCACAGATTTGTACTAATCACCTTGATCCTACCTCGTGCTTCTTCCCTCAGAACTTGATTGCCAATGTTAGAACACCACTTTTTCTTCTTAATACAGCTTATGATTCATGGCAGATCCAGTCAAGTTTAGCTCCTCCATCAGCAGATCCACATGGATATTGGCATGAATGCAGATTAAACCATGCTAAATGCACTAGGCCACAAATCCAATTTCTACAAGGATTCAGGAATCACATGTTGAACTCTATTAAAGACTTCTCAAGATCAAACAAGAATGGATTGTTTATTAATTCGTGTTTTGCTCACTGCCAAACCGAGAGGCAGGATACATGGTTTTCAGACAATTCTCCGGTTATTGGGAACAAGGTAATTGCTTTAGCTGTTGGAGACTGGTATTTCGACCGAGAAGGTGTTAAGGTCATTGATTGTCCTTATCCTTGTGATAATACATGTCACCATCTGGTTTTCAGTTGA 1266 0.4131 MAKLFWVGIAIGLFFTNFVYGQQHHFFNETEELFLLEAHEHASYSSSFLQGNGNPLLVGLTLIHNAAAKGAVCLDGTLPGYHLHRGYGSGTNSWLVNLEGGGWCNNVRTCVYRKKTRRGSSLFMEKEIPFTGILSNKPEENPDFFNWNRVKLRYCDGGSFTGDGEDQDAELQFRGQRIWAAAMEDLMSKGMHFANQALLSGCSAGGLATIIHCDEFRGLFPRTTKVKCLSDAGLFLDSIDISGERTLRNMYNGVVGLQDAQKNLPQICTNHLDPTSCFFPQNLIANVRTPLFLLNTAYDSWQIQSSLAPPSADPHGYWHECRLNHAKCTRPQIQFLQGFRNHMLNSIKDFSRSNKNGLFINSCFAHCQTERQDTWFSDNSPVIGNKVIALAVGDWYFDREGVKVIDCPYPCDNTCHHLVFS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4798 421 PANTHER PECTIN ACETYLESTERASE 4 420 - -
Mal3g4798 421 PANTHER NOTUM-RELATED 4 420 IPR004963 GO:0016787
Mal3g4798 421 Pfam Pectinacetylesterase 56 400 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4798 Mal-Chr3 127965376 127969306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4798 1 420 Carbohydrate Esterase AT1G57590 65.952 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4798 K19882 - gmx:100788448 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1560 1 20398082 20401738 Mal3g4798 3 127965376 127969306 ECH
Mal1g1591 1 20734239 20737780 Mal3g4798 3 127965376 127969306 ECH
Mal5g5036 5 123989697 123994431 Mal3g4798 3 127965376 127969306 ECH
Mal3g4798 3 127965376 127969306 Mal3g4798 3 127965376 127969306 ECH
Mal3g4798 3 127965376 127969306 Mal1g1560 1 20398082 20401738 PCT