Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4776 ATGGCGTCTTCAATCTCAACTCAATTGCTTCAATCTCATCTTCAGGTTGGTAATTTTAGCCAAGATGCGTTGTCTATGGTTCAAAGGTCACATACCGTATCACGGATTGGTTACAATAAATCATTTTCATTAAGATCACACGTTGCCTTGAGGTTTTCAACCACGCAACAATCTCAAACAAGATCAATTAGATATAGCAGCAAAGTCACATGTGCAGCTGCTGCTTCTGAAAATGTTCAAGAGCTGCAAGCCAAAGTGACTACCAAATGTTTCTTTGATGTAGAAGCTGGGGGTGAATCTTTGGGCAGGATTGTTTTGGGCTTGTTTGGAGAGGTTGCTCCTAAAACTGTTGAAAATTTCCGTGCTTTGTGCACAGGAGAGAAAGGATCCGGTTACAAAGGATGCTCCTTCCATCGTATAATCAAAGAATTCATGATTCAGGGAGGGGACTTCACTAAAGGAGATGGAACCGGTGGAGCAAGTATATATGGTTCTAGTTTTGAAGATGAGAGCTTTGCCTTGAAGCATGTTGGTCCTGGAGTTTTGAGCATGGCAAATGCCGGTCCTAATACCAATGGTAGTCAATTTTTTATTTGCACTGTAAAGACTCCTTGGTTAGACAATCGACATGTTGTGTTTGGACATGTCATTGATGGAATGGATGTTGTGAGGGCACTTGAGTCTCAGGAAACAAGCAGGTTAGATATCCCTAAAAAGCCTTGCAGAATCGTTAACTGCGGAGAACTGCCTATTGATGGTTGA 762 0.4186 MASSISTQLLQSHLQVGNFSQDALSMVQRSHTVSRIGYNKSFSLRSHVALRFSTTQQSQTRSIRYSSKVTCAAAASENVQELQAKVTTKCFFDVEAGGESLGRIVLGLFGEVAPKTVENFRALCTGEKGSGYKGCSFHRIIKEFMIQGGDFTKGDGTGGASIYGSSFEDESFALKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRALESQETSRLDIPKKPCRIVNCGELPIDG* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4776 253 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 132 149 IPR020892 GO:0003755|GO:0006457
Mal3g4776 253 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 149 IPR002130 GO:0000413|GO:0003755
Mal3g4776 253 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 208 223 IPR002130 GO:0000413|GO:0003755
Mal3g4776 253 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 108 123 IPR002130 GO:0000413|GO:0003755
Mal3g4776 253 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 180 195 IPR002130 GO:0000413|GO:0003755
Mal3g4776 253 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 195 207 IPR002130 GO:0000413|GO:0003755
Mal3g4776 253 Gene3D - 75 252 IPR029000 -
Mal3g4776 253 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 43 252 - -
Mal3g4776 253 SUPERFAMILY Cyclophilin-like 85 249 IPR029000 -
Mal3g4776 253 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 91 248 IPR002130 GO:0000413|GO:0003755
Mal3g4776 253 CDD cyclophilin_ABH_like 89 247 - -
Mal3g4776 253 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 43 252 - -
Mal3g4776 253 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 92 247 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4776 Mal-Chr3 127741212 127743724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4776 102 244 U-box Gene Family AT5G67530 45.139 1.07e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4776 K03768 - gmx:100785805 377.867