Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4771 ATGGGAAGACATTCTTGTTGCTACAAGCAAAAGCTTAGGAAGGGTCTATGGTCACCTGAGGAGGATGAAAAACTTTTGAATCATATTACTAAATATGGTCATGGATGTTGGAGTTCAGTTCCTAAGCAAGCAGGTCTTCAAAGGTGTGGTAAGAGCTGTAGGCTTAGGTGGATCAATTACTTAAGGCCTGATTTAAAAAGAGGTACATTTTCACAAGAAGAAGAAGATCTCATCATTGAACTTCATTCAGTATTAGGAAATAGATGGTCCCAAATTGCAGCACAATTGCCAGGGAGGACTGATAATGAAATAAAGAATCTTTGGAATTCTTGCTTAAAGAAGAAACTGAGACAAAAAGGTATAGACCCTGTAACTCATAAACCACTCTCTGAGATTGATAATGGAGAAGAGGAGGAAGAGAAAACAAGAAGCCAAGAGAAAGTAGCAGACATATCAGAATCTGATGAATTGAACCTTATGAGATCAGAAAGTAGTTCCAAATCAGAAGCAGGTTCCTATGAGCATAAACAATCTTCAATTTTTCAAAAAGCCTATGCAACTGAGATGCAAGTGGAAGGTTCTTGTTCCAACTATTTGATGGGGAATCATTCTATTCATATGAGTTATAATACATCCACTGATAATGTTCCAAACTATTCAAACTCTTCTCATTGGTTCAACCAAACAGAATTAAAACCTTTTGACATGAACTCTGAATTTACTTCTAATTCTAACATCATGTCAATTCTTCCACCAACTAATAGCTCATTTTTTCCTAATACTTTTTGCTACAAACCAGAAGATGTTTCTACTTCTTCAGCTTCTTTCCCTATGAAGAATTGTATCTTATCTCCTTGGGGAATCACAGATTGTGACACCTCTATTAAAGAGAATCAAACAGAAGAAGAAGCCAAGTGGAATGAGTATCTTCACAATCCAATGTTAATGCTACAAAACCAAGCATCTGAATCTTTATGCAATGAAATAAAGCCTGCCACAAATTTGGGCCCTGATGGTTTAGGGGACATATTGCCACATTCCAAGCAACAAGAATCTTCTCAATCTTATAATATAGCAGCTTTTGGACATGTATAG 1095 0.3635 MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQKGIDPVTHKPLSEIDNGEEEEEKTRSQEKVADISESDELNLMRSESSSKSEAGSYEHKQSSIFQKAYATEMQVEGSCSNYLMGNHSIHMSYNTSTDNVPNYSNSSHWFNQTELKPFDMNSEFTSNSNIMSILPPTNSSFFPNTFCYKPEDVSTSSASFPMKNCILSPWGITDCDTSIKENQTEEEAKWNEYLHNPMLMLQNQASESLCNEIKPATNLGPDGLGDILPHSKQQESSQSYNIAAFGHV* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4771 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mal3g4771 364 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal3g4771 364 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal3g4771 364 CDD SANT 17 61 IPR001005 -
Mal3g4771 364 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mal3g4771 364 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal3g4771 364 PANTHER HOMEODOMAIN-RELATED 1 280 - -
Mal3g4771 364 SMART sant 66 114 IPR001005 -
Mal3g4771 364 SMART sant 13 63 IPR001005 -
Mal3g4771 364 MobiDBLite consensus disorder prediction 123 174 - -
Mal3g4771 364 MobiDBLite consensus disorder prediction 123 162 - -
Mal3g4771 364 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mal3g4771 364 Gene3D - 68 149 - -
Mal3g4771 364 CDD SANT 69 109 IPR001005 -
Mal3g4771 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal3g4771 364 Gene3D - 11 67 - -
Mal3g4771 364 PANTHER MYB DOMAIN PROTEIN 55 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4771 Mal-Chr3 127683304 127684707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4771 1 155 MYB Transcription Factor Family AT4G01680 81.290 2.18e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal3g4771 Myb_DNA-binding 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4771 K09422 - gmx:100037467 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4771 3 127683304 127684707 Mal1g1593 1 20743391 20744846 PCT