Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4766 ATGGGAAAAACAAATTATAGTTCAAATTCCTCTTCATCTATTAGCAGCAACAGCAACCACAATCTTTTTATTTCAACTGCATCCTCTCTCTCACATCTCAACACCCAACAACTTCCCACTGATCTTAGTCTTGGACTCACCATTTCCCCTACTCAACATTTTCATGCTGGCTCCTCTGTTTCAAGGAGGCAATGGCAACAAAACTATGATAGCAGTGATCATAGTAGCTTCTTTGTGAAAGTGTACATGGAAGGGATTCCAATTGGTAGAAAACTCAATATACTAGCTCATCAAAGTTACCATGAGTTAGTAAAGACTCTTGAGCACATGTTTGACACTACTATTCTATGGGGAAAGGAGATGGATGGAGTGCAACCAGAGAGATGCCACGTGTTAACTTATGAAGATGAAGAAGGGGATTTGGTCATGGTTGGAGATGTTCCTTGGGAGATGTTTTTATCTACTGTTAAGAGGTTGAAGATCACAAGGGTAGACACATTTGGGTGTTAG 510 0.402 MGKTNYSSNSSSSISSNSNHNLFISTASSLSHLNTQQLPTDLSLGLTISPTQHFHAGSSVSRRQWQQNYDSSDHSSFFVKVYMEGIPIGRKLNILAHQSYHELVKTLEHMFDTTILWGKEMDGVQPERCHVLTYEDEEGDLVMVGDVPWEMFLSTVKRLKITRVDTFGC* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4766 169 Gene3D - 70 168 - -
Mal3g4766 169 Pfam AUX/IAA family 68 163 IPR033389 -
Mal3g4766 169 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 168 IPR003311 GO:0005634|GO:0006355
Mal3g4766 169 SUPERFAMILY CAD & PB1 domains 67 161 - -
Mal3g4766 169 ProSiteProfiles PB1 domain profile. 76 166 IPR000270 GO:0005515
Mal3g4766 169 PANTHER AUXIN-INDUCED PROTEIN 8 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4766 Mal-Chr3 127637576 127638376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4766 80 161 B3 DNA Binding Superfamily AT4G23980 37.805 2.78e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Mal3g4766 AUX_IAA 1.3e-29 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4766 K14484 - gmx:100783140 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4766 3 127637576 127638376 Mal1g1598 1 20865141 20866148 PCT