Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4760 ATGGATGTGAGTGGAGGAAATATGGACAAAAAATGGCCAAGGGTAACCCTTGTCCCTCGTGCCTACTATCGTTGCACTATGGCTCTAGGATGCCCAGTTCGCAAACAGGTCCAAAGATGTGCAGAAGACAAGACAATACTAATAATAACAACATACGAAGGCAACCAAAATAACCCACTCCCACCAGCTGCAACTGCCATAGCAAACACAACATCAGCAGCAATGCTGCTATCATCAACCAAGGAATCATCATCATCATTTCCCTATGCAACAATGTCATCAACCCTATCACCTTCTCAACCCTTCCCAACAAATCAAAACAGTGTTCCTCTGCCATTGTTCTTCTCACACAAGCTACCATCTATGGCTTTGCCATTACTTCAACTAGGGCAACCACCACCACCTTCTTCTATGGTTGAGAGTGTTAGAGCAGCGATTTCGTCAATCATTGGAGCACAAAGAGGGAGTAATTATCCTCAAAGGAAAACTGTGCCCTAA 498 0.4438 MDVSGGNMDKKWPRVTLVPRAYYRCTMALGCPVRKQVQRCAEDKTILIITTYEGNQNNPLPPAATAIANTTSAAMLLSSTKESSSSFPYATMSSTLSPSQPFPTNQNSVPLPLFFSHKLPSMALPLLQLGQPPPPSSMVESVRAAISSIIGAQRGSNYPQRKTVP* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4760 165 Gene3D WRKY domain 8 62 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g4760 165 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 19 104 IPR044810 GO:0003700
Mal3g4760 165 ProSiteProfiles WRKY domain profile. 19 61 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g4760 165 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 19 104 - -
Mal3g4760 165 SUPERFAMILY WRKY DNA-binding domain 16 61 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g4760 165 Pfam WRKY DNA -binding domain 18 55 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g4760 165 SMART WRKY_cls 10 60 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4760 Mal-Chr3 127595685 127596557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4760 19 104 WRKY Transcription Factor Family AT4G04450 58.416 2.42e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal3g4760 WRKY 9.4e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4760 - - mtr:MTR_7g110720 154.066