Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4748 ATGAATACTAACCTATCCTTTTTCCTCATCTTGATTATTAATATTACTTTTGGTATTGTCCACAGTGATAAATTCAATGAGTTTAGAATCCCCCCCAATAAGGTTGTCAAGTCCTTATGCAAAGGCACCGATGACAGTAAACTTTGCCATGATGTCCTCTACCCCGTGAAAACCTCAAACTCAATAGATTACATTGATGTTTTGGTGAAAAACTTGATGGAAAGCGTGGTCAACGCATTTAATGATACGAGTAATAAGCTTAATTTTATCGATCATCATAAAAGCAACGGTACCAAGATGGCTCTTGAGGACTGTAAGGACATGTTACAGTTCTCTATCGATGAAATTAGTAGCATTCACAATATACATAATCGTTCAGCAGAACTCAAGAATTCTTTGGGGGCTGTCATTGCCTACCAACAATCTTGCCTTGATGGTTTTTTTGATACGAAAAGTGATAACAAGGCCTTGGAAAATGTTGGAAAGCTCACTGGTTTGGCACTTGATGTTGCATCCCAGATTTCTCATTTTACGAATATTAAACCTTTAGTGGATAGTGAAGGGTATCCAACTTGGTTTTCCGTTGATGATCGTAAGGTGATGGGTATGGGTCCGATTGAAGCTAATGATGATGATGATGATGTCGTAGTAAATGTTGCCAAGGATGGTAGTGGCCAATATATGACTATTGCTGATGCTGTTAATGCATACCCAAATAACCATCAAGGAAGGTACATTATCAACATTAAGAGTGGTGTATATGAGGAGAACATTATTGTTGACAAGAATAAACCAAATGTTTTCATGGTTGGTGATGGCCCTACAAAAACGATTATCACCGGAAGCAAAAGCTATAGCCAGGGTTTCAAGACAATGAGAACCGCCACTTTTTCAACCGTTGCACAAGGTTTCGTTGCGAGGGGAATTGCTTTTGAGAACACCGCTGGTCCTGAAGGTCACCAAGCAGTGGCACTTCACGTGCAAGGTGATCGTTCGGCTTTCTACGACTGTGTAATTAGTGGTTACCAAGACACATTGTATGTACATGCCCATCGTCAGTATTATCGTAAATGTGAAATCTCTGGCACTATTGACTTCATATTTGGTTACTCGTCAACCTTGATACAAGATTCCAAGATCATTTTAAGAATGCCTTTGCCACATCAAATTAACACAGTGGTAGCAGATGGAACAGATCAAAAGAACATGCCAACCGGAATTGTCCTTCAAAATTGTGTCATTTTGGCAGAGGATGAATTGTTACCACACAAGTTGACCGTAAAGTCTTACTTGGCAAGACCATGGAAGGAATTTTCAAGAGCTGTGTTTATTGAGAATGAGATTGATGATGTTATTCAGCCAGAAGGGTATATACCATGGAAAGAAGATTATCCAAACATTGAGAACTCTTACATGGCTGAGTTTGGCAACAGTGGAGAAGGTGCTAGTGTTGAAAGAAGAGTGCCTTGGGCTAAGGGACTCATTAGCAAAGAAGAAGCTTTTCAATTTACTGCTGGTCAATTTCTTCAAGCTAACACATGGTTGCCTACAACTGGCATTCCTTTTCATAATGGCTTCATAAGCAATTAA 1590 0.3943 MNTNLSFFLILIINITFGIVHSDKFNEFRIPPNKVVKSLCKGTDDSKLCHDVLYPVKTSNSIDYIDVLVKNLMESVVNAFNDTSNKLNFIDHHKSNGTKMALEDCKDMLQFSIDEISSIHNIHNRSAELKNSLGAVIAYQQSCLDGFFDTKSDNKALENVGKLTGLALDVASQISHFTNIKPLVDSEGYPTWFSVDDRKVMGMGPIEANDDDDDVVVNVAKDGSGQYMTIADAVNAYPNNHQGRYIINIKSGVYEENIIVDKNKPNVFMVGDGPTKTIITGSKSYSQGFKTMRTATFSTVAQGFVARGIAFENTAGPEGHQAVALHVQGDRSAFYDCVISGYQDTLYVHAHRQYYRKCEISGTIDFIFGYSSTLIQDSKIILRMPLPHQINTVVADGTDQKNMPTGIVLQNCVILAEDELLPHKLTVKSYLARPWKEFSRAVFIENEIDDVIQPEGYIPWKEDYPNIENSYMAEFGNSGEGASVERRVPWAKGLISKEEAFQFTAGQFLQANTWLPTTGIPFHNGFISN* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4748 529 PANTHER PECTINESTERASE 6 526 - -
Mal3g4748 529 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 156 IPR006501 GO:0004857
Mal3g4748 529 CDD PMEI-like_3 38 175 - -
Mal3g4748 529 PANTHER PECTINESTERASE 6 526 - -
Mal3g4748 529 SUPERFAMILY Pectin lyase-like 216 524 IPR011050 -
Mal3g4748 529 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 174 IPR035513 -
Mal3g4748 529 Gene3D - 213 526 IPR012334 -
Mal3g4748 529 SMART PMEI_2 31 170 IPR006501 GO:0004857
Mal3g4748 529 ProSitePatterns Pectinesterase signature 2. 360 369 IPR033131 -
Mal3g4748 529 Pfam Plant invertase/pectin methylesterase inhibitor 35 169 IPR006501 GO:0004857
Mal3g4748 529 Pfam Pectinesterase 217 511 IPR000070 GO:0030599|GO:0042545
Mal3g4748 529 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 175 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4748 Mal-Chr3 127508807 127510791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4748 34 528 Carbohydrate Esterase AT3G05610 36.994 4.11e-118 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4748 K01051 - gmx:100808559 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4748 3 127508807 127510791 Mal1g1614 1 21091164 21093111 PCT