Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4746 ATGAAGGGAAAGATAATTATTTCCGCGGTTTCACTTATCCTCGTTGTAGGTGTTGCAATCGGCGTTGTTGTCGCCGTTCGCAAAAATGGTGAAGACCCTGAGATTAAAACTCAACAAAGAAATCTTAAAATTATTTGCCAAAACGCAGATGACCAAAAGCTCTGCCATGAAACTCTTAGCTCTGTTCGTGGCACCGACCCTAAGGCATACATAGCCGCCGCCGTGAAGGCAGCTACTGACAATGTCATTAAGGCTTTTAACATGAGTGACAGGCTCACCACTGAATATGGAAAGGAAAACGGTGTCAAGATGGCTCTTGATGACTGCAAGGAATTGATGCAATTCGCTTTGGACAGTCTTGAACTCTCCACCAACTGTGTTCATGAGAAAAACATTCAAGGTATTCATGACCAAACAGCTGATATGAGGAATTGGTTGAGTGCAGTTATCTCTTACAGACAAAGTTGTATGGAAGGATTTGACGATACAATTGAAGGTGAGAAGAAGATCAAGGAACAATTCCATGTTCAAACTTTGGACAGCGTACAAAAGGTCACCGCTGTTGCCCTTGACATTGTGACTGATTTGACCAGCATCCTCGAGCAATTCAACTTGAAGTTTGATCTCAAACCTGCTTCTCGTCGTCTTCTTGATTCTGAGGTGCATGTTGATGATGATGGATACCCTTCATGGGTCTCTGCTGTTGATCGCAAGCTTTTGGCTAAAATGCAAGGAAAGGGATGGAGAGCAAATATTAAGCCTAATGTTGTTGTTGCCAAGGATGGTAGCGGTCAATTTAAAACCATCAAAGATGCTATTGCCTCTTACCCTAGGGGAAACAAAGACAGATATGTTATCTACGTTAAGGCTGGTGTCTATGACGAATACATCACCATCCCCAGTGATGCTGTTAACATTCTTATGTATGGTGATGGCCCTACGAGGACCATTGTCACTGGTAGAAAGAGTTTCGGTTTTGATGGTATCAAGACCATGAATACTGCCACCTTCGCCAACACCGCATCTGGGTTCATTGCAAAATCAATGAAATTTGAAAACACAGCTGGTCCCGCTGGTCACCAAGCCGTGGCTTTTAGAAACCAAGGAGATATGTCTGCTTTGGTGGATTGTCATATCATTGGTTACCAAGATAGCTTGTATGTTCAAACCAACAGACAATTCTACCGCGACTGTGTTATCTCTGGTACCGTTGACTTCATCTTTGGAACATCCGCCACCTTGATCCAACACTCTACGATCATCGTAAGGAAGCCTGCAAATAATCAATTCAACACAATTACCGCAGACGGATCAGACGAGAAGAGTTTGAATACTGGTATTGTGATCCAAGGCTGCAATATCATTCCAGAAGCAGCATTGTACCCTGAAAGATTCACAACTAAATCTTACTTAGGCAGGCCATGGAAGAAATTAGCAAAGACAGTCATCATGGAATCCACCATTGGTGATTTCATTCATCCAGATGGATGGGCCCTTTGGCAAGGAGAAAATAATCATAACACATGTTACTATGCAGAGTACGCCAACAATGGACCTGGTGCCAATGTTGCCAGAAGGATCAAGTGGAAGGGTTATCACGGTGTCATTAGCAAGGCCGAGGCTACCAAATTCACCGCTGGTATGTGGCTCCAGGCTGGACCCACTTCCGCACCAACATGGTTGAATGGTCTTCAAGTTCCTCACTACCTTGGCTTCACAGCTTGA 1725 0.4388 MKGKIIISAVSLILVVGVAIGVVVAVRKNGEDPEIKTQQRNLKIICQNADDQKLCHETLSSVRGTDPKAYIAAAVKAATDNVIKAFNMSDRLTTEYGKENGVKMALDDCKELMQFALDSLELSTNCVHEKNIQGIHDQTADMRNWLSAVISYRQSCMEGFDDTIEGEKKIKEQFHVQTLDSVQKVTAVALDIVTDLTSILEQFNLKFDLKPASRRLLDSEVHVDDDGYPSWVSAVDRKLLAKMQGKGWRANIKPNVVVAKDGSGQFKTIKDAIASYPRGNKDRYVIYVKAGVYDEYITIPSDAVNILMYGDGPTRTIVTGRKSFGFDGIKTMNTATFANTASGFIAKSMKFENTAGPAGHQAVAFRNQGDMSALVDCHIIGYQDSLYVQTNRQFYRDCVISGTVDFIFGTSATLIQHSTIIVRKPANNQFNTITADGSDEKSLNTGIVIQGCNIIPEAALYPERFTTKSYLGRPWKKLAKTVIMESTIGDFIHPDGWALWQGENNHNTCYYAEYANNGPGANVARRIKWKGYHGVISKAEATKFTAGMWLQAGPTSAPTWLNGLQVPHYLGFTA* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4746 574 SMART PMEI_2 37 192 IPR006501 GO:0004857
Mal3g4746 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 197 IPR035513 -
Mal3g4746 574 Pfam Plant invertase/pectin methylesterase inhibitor 44 192 IPR006501 GO:0004857
Mal3g4746 574 PANTHER PECTINESTERASE 3 572 - -
Mal3g4746 574 Pfam Pectinesterase 255 551 IPR000070 GO:0030599|GO:0042545
Mal3g4746 574 TIGRFAM PME_inhib: pectinesterase inhibitor domain 14 193 IPR006501 GO:0004857
Mal3g4746 574 Gene3D - 249 571 IPR012334 -
Mal3g4746 574 ProSitePatterns Pectinesterase signature 1. 280 299 IPR018040 -
Mal3g4746 574 SUPERFAMILY Pectin lyase-like 252 553 IPR011050 -
Mal3g4746 574 PANTHER PECTINESTERASE 3 572 - -
Mal3g4746 574 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Mal3g4746 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 197 IPR035513 -
Mal3g4746 574 CDD PMEI-like_3 45 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4746 Mal-Chr3 127362333 127434656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4746 1 572 Carbohydrate Esterase AT2G47030 39.539 7.09e-142 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4746 K01051 - gmx:100781507 793.497