Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4740 ATGGAAGCTTTTCAATTGTACGGTAATGGTGGTAGTTCCTCTAATTTAAGGGCTATGGGAAAAAAATCAAAAGAATGGGATTTGAATAATTGGAAATGGGATGGTGATCTTTTCATAGCTACTAGTAAATTGAATCCGGTACCGGAACACCGTCAATTTTTACCTATTCCGGTTGGTGGTGGTGGTTGCTCTAACTCAAATAGTTCATCTTCTTGTTCAGAACAGTTAGATCTTGTGATTTGTCAAGGGAACAAGGAAGGTGAGAGGAAAAGGAGGGTTATTGCTGTGGAAGATGAACTAGGTTTGAATAAGGATGGTGGTAGTCTTAGTTTAAACCTTGGTGGTGGTGGTGTTGCTCAAATTGCTACATGGGAAGGAAATAATGGGAAGAAAAGTAGAGTAGCTGGTGGAGGTAGTTCTAGTAGAGCATTTTGTCAGGTGGAGGATTGTCGCGCAGATCTCAACAATGCTAAAGATTATCACCGACGACATAAAGTTTGTGAGATACATTCAAAGGCTAGTAAGGCCCTTGTTGGAAATGCGATGCAGCGGTTCTGCCAACAATGTAGTAGGTTTCACTTGCTTCAAGAGTTTGATGAAGGAAAGAGAAGTTGTCGAAGACGTTTGGCAGGCCATAATAAAAGGAGGAGGAAAACAAATCAAGATGCTGCTGCTCCTAATGGAAGTTCACCGAACGATGATCAGACTAGCAGTTATCTGTTGATAAGTTTATTGAAGATACTTTCAAATATGCAACCCGACAGGTCAAATCAGACCACAGATCAGGATCTGCTTACTCATCTTTTAAGGAGCCTTGCTAATCAGAATGGTGATCAAGGAGGAAGGAACTTGTCTAACCTTTTACGGGAACCTGAGAATCTGTTGAAAGAAGGGTCTGTATCTGGGAAGTCTGAGATGATTTCAACTTTATTTACTAATGGTTCTCAAGGTTCTCCAACTGTTACAGTACAGAATCAAACAGTTTCTAATGGTGAAATCCAGCATCAAGTGATGCATGCACATGATGCTAGGGTTGCTGATCAACAAACCACATTTTCTGCAAAGCCCGGTGTTTCAAATAGCCCTCCATCTTACTCAGAAGCCAGAGATAGTTCTGCTGGACAGACCAAGATGAATGATTTTGATCTGAATGACATCTATATTGACTCAGACGATGGCATAGAGGACATAGAAAGGTTGCCTGTCACTACAAATGTTGGTACTAGCTCTCTTGATTACCCATGGATGCAACAAGATTCACATCAGTCAAGTCCGCCTCAAACAAGTGGAAATTCAGATTCTGCATCTGCCCAGTCCCCTTCTAGTTCAACTGGGGAAGCTCAGAATCGCACGGATCGGATTGTTTTCAAACTCTTTGGTAAAGGACCGAGCGATTTTCCTCTTGTACTCAGAGCACAGATTCTTGATTGGTTATCCCACAGTCCAACTGATATTGAAGGCTATATACGGCCTGGTTGTGTTGTTTTGACTATTTATCTGCGTCAGGCTGAGGTTGTGTGGGAGGAGCTTTGCTTTGATCTGACTTCCAGTTTGAATAGGCTTCTGGATGTCTCAGATGATGATTTTTGGAGAACTGGATGGGTTCACATCAGGGTGCAGCATCAGATGGCCTTCATTTTCAATGGCCAGGTTCTCATCGATACATCTCTGCCTTTCAGGAGTAATAATTATGGTAAGATTTTGAGTGTTAGTCCAATTGCTGTACCAGCATCAAAGACATCTCAATTTTCTGTGAAGGGTATCAACCTGACTCGCCCTGCGACAAGGTTATTGTGTGCTTTAGAAGGGAATTATTTGGACTGTGAAGATACTCATGAGTCTATGGATCAATGCTCCAAGGATCTTGATGAGCTTCAGTGCGTCCAATTTTCATGTTCTGTACCTGCGATGAATGGACGAGGGTTTATTGAGATTGAGGACCAGGGTTTGAGCAGCAGTTTTTTTCCTTTCATAGTTGTGGAGGAGGATGTTTGCTCTGAAATCTGTGTGCTTGAGACTTTACTGGAATCAAGTGATACTTATCCAGATGTTGAAGGGGATGGAAAAATTCAAGCGAAAAATCAAGCCATGGATTTCATTCATGAAATGGGTTGGCTTCTCCACAGAAGCCAAATAAAATCTAGGACAGTTCACTTGAATTTTAGTGTGGATCTGTTTCCATTAGATCGATTCAAGTGGCTCATGGAGTTCTCTGTGGACCATGATTGGTGTGCAGTAGTTAAAAAGCTATTGAACCTCATGCTTGATGGAATAGTGAGTACAGGAGACCACACATCCCTGCATCTTGCACTTTCAGAGTTGGGTCTCCTTCACAGAGCTGTGAGGAGAAATAGCAGGCAGTTGGTGGAGCTTCTTTTGAGATTCGTTCCTCAAAATATTTCAGATAAACTAAGACCTGAAGACAAGGCGCTGGTTAATGGAGAGAATCAAAACTTCTTGTTTAGACCTGATGCTGTCGGTCCTGCTGGTTTGACACCACTCCATATAGCAGCCGGGAAAGATGGTTCTGAAGATGTACTGGATGCTTTGACTAATGACCCTTGCATGGTGGGAATTGAAGCATGGAATAGTGCTCGCGACAGCACGGGGTCAACACCTGAGGATTATGCACGGTTACGTGGTCATTATACTTACATTCACTTGGTGCAAAAGAAAACCAACAAGAGCCAAGGAGGGGCTCACGTGGTGGTTGATATTCCTAGCAATCCAACAAGGCTCGATACAAGCCAGAAGAAAGATGAACCGTGCTCTACCTTTGAGATTGGAAAGGCTGAAGTTAAAAATGTTCGAAAGGACTGCAAACTTTGTGATCATAAGCTGTCGTGTAGAACTGCTGTAAGAAAGTCTTTCGTATACAGACCTGCAATGCTGTCAATGGTGGCTATAGCAGCGGTCTGTGTCTGTGTGGCCCTTCTGTTCAAAAGCTCACCAGAAGTTCTGTATGTATTCCGACCTTTCAGGTGGGAATCATTGGATTTTGGAACAAGCTGA 3012 0.4273 MEAFQLYGNGGSSSNLRAMGKKSKEWDLNNWKWDGDLFIATSKLNPVPEHRQFLPIPVGGGGCSNSNSSSSCSEQLDLVICQGNKEGERKRRVIAVEDELGLNKDGGSLSLNLGGGGVAQIATWEGNNGKKSRVAGGGSSSRAFCQVEDCRADLNNAKDYHRRHKVCEIHSKASKALVGNAMQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTNQDAAAPNGSSPNDDQTSSYLLISLLKILSNMQPDRSNQTTDQDLLTHLLRSLANQNGDQGGRNLSNLLREPENLLKEGSVSGKSEMISTLFTNGSQGSPTVTVQNQTVSNGEIQHQVMHAHDARVADQQTTFSAKPGVSNSPPSYSEARDSSAGQTKMNDFDLNDIYIDSDDGIEDIERLPVTTNVGTSSLDYPWMQQDSHQSSPPQTSGNSDSASAQSPSSSTGEAQNRTDRIVFKLFGKGPSDFPLVLRAQILDWLSHSPTDIEGYIRPGCVVLTIYLRQAEVVWEELCFDLTSSLNRLLDVSDDDFWRTGWVHIRVQHQMAFIFNGQVLIDTSLPFRSNNYGKILSVSPIAVPASKTSQFSVKGINLTRPATRLLCALEGNYLDCEDTHESMDQCSKDLDELQCVQFSCSVPAMNGRGFIEIEDQGLSSSFFPFIVVEEDVCSEICVLETLLESSDTYPDVEGDGKIQAKNQAMDFIHEMGWLLHRSQIKSRTVHLNFSVDLFPLDRFKWLMEFSVDHDWCAVVKKLLNLMLDGIVSTGDHTSLHLALSELGLLHRAVRRNSRQLVELLLRFVPQNISDKLRPEDKALVNGENQNFLFRPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWNSARDSTGSTPEDYARLRGHYTYIHLVQKKTNKSQGGAHVVVDIPSNPTRLDTSQKKDEPCSTFEIGKAEVKNVRKDCKLCDHKLSCRTAVRKSFVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFRPFRWESLDFGTS* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4740 1003 MobiDBLite consensus disorder prediction 209 235 - -
Mal3g4740 1003 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 15 1002 IPR044817 GO:0003677
Mal3g4740 1003 SUPERFAMILY SBT domain 143 223 IPR036893 GO:0003677|GO:0005634
Mal3g4740 1003 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 15 1002 - -
Mal3g4740 1003 MobiDBLite consensus disorder prediction 410 448 - -
Mal3g4740 1003 MobiDBLite consensus disorder prediction 350 378 - -
Mal3g4740 1003 ProSiteProfiles Zinc finger SBP-type profile. 142 219 IPR004333 GO:0003677
Mal3g4740 1003 SUPERFAMILY Ankyrin repeat 761 890 IPR036770 -
Mal3g4740 1003 Pfam SBP domain 145 218 IPR004333 GO:0003677
Mal3g4740 1003 Gene3D - 136 206 IPR036893 GO:0003677|GO:0005634
Mal3g4740 1003 Gene3D - 734 909 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4740 Mal-Chr3 127286490 127293846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4740 20 1003 SBP-box Gene Family AT3G60030 54.845 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mal3g4740 SBP 9.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4740 - - gmx:100809806 1514.21