Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4705 ATGTCGAAGAGAAAGTTCGGATTTGAAGGTTTCGGCATAAACCGTCAATCAACCTACAGTTTCGAACGATCTCAACCTGCTCAACGACTCTACGTTCCTCCTTCATCGCGTAAAAGCCACGACAATTACGAAGACAACGACCTAGATAACATCGAGTACGATGATGATGCTAGAGAAGAAAAAGAAGAATCAAACAACAATAACAACGGTGGCGGTGGTGGTGGTGGTGAGGAGGAAGAGGAAATAGATCCATTAGATGCATTCATGGAAGGTATACACGAGGAGATGAAATCGGCGCCGCCACCGAAGCTGAAGGAGAAGGTGGAAGATAGATATAAAGATGATTTAGAGGATGATCCAATGGAGAGTTTTTTGAGGGCGAAGAAGGATTTAGGGTTGACGCTAGCGTCGGAGGCGTTGCATGCTGGATATGATTCTGATGAGGAGGTTTATGCTGCTGCTAAAGCTGTGGATGCTGGTTTGATTGATTATGATTCTGATGATAATCCTATTGTTCTTGATAAGAAGAAAATTGAACCTATTGCTCCTCTTGATCATACTGAAATTGATTATGAGCCTTTCAATAAGGATTTTTATGAGGAGTCACCTTCAATATCAGGTATGAGTGAGCAAGATGTAACTGATTACAGGAAGAGTCTGGCTATTCGGGTATCGGGTTTTGAAGTTCCTAAGCCAGTAAAAACATTTGAGGACTGTGGGTTTGCTTCACAAATTATGGGTGCTATAAAGAAACAAGGTTATGAGAAGCCCACGTCTATACAATGCCAAGCTTTACCGGTTGTGCTTTCTGGTAGAGATATCATTGGCATAGCAAAAACTGGTTCTGGTAAGACTGCTGCTTTTGTGCTTCCTATGATCGTGCATATCATGGATCAGCCTGAACTTCAGAAGGAGGAAGGTCCTATAGGAGTGATATGTGCACCTACCAGAGAATTGGCTCATCAGATATATCTTGAGGCAAAGAAATTTGCTAAAGCACACGGTATACGGGTCTCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGTTCAAAGAACTCAAGGCAGGCTGTGAGATAGTTGTTGCTACACCTGGGAGATTGATAGACATGCTAAAAATGAAGGCGTTGACAATGCTGAGGGCAACATACCTGGTGCTTGACGAGGCTGATCGGATGTTTGATCTTGGATTTGAGCCACAAGTAAGGTCAATTGTTGGTCAGATTAGGCCAGACCGCCAAACTTTGCTCTTTTCTGCAACAATGCCTCGCAAAGTCGAAAAGCTAGCCAGGGAAATCCTTTCCGATCCTATCAGAGTGACAGTGGGAGAGGTGGGGATGGCAAATGAAGACATTACTCAAGTTGTTCAAGTAATTCCTTCTGATTCTGAGAAATTGCCGTGGCTTCTTGAGAAATTGCCCGAAATGATTGATCAAGGTGATACATTAGTTTTTGCTTCCAAAAAGGCCACTGTGGATGAAATTGAAGCACAATTGGGTCAGAGAGGCTTTAAAGTTGCTGCCCTGCATGGTGATAAGGATCAATCTTCTCGTATGGATATTTTACAGAAATTTAAATCTGGCACCTACCATGTACTTATTGCAACTGATGTTGCCGCTCGTGGTCTTGACATCAAGTCAATTAAAACCGTGGTAAACTTTGATATTGCTAAAGATATGGACATGCATGTTCATCGCATTGGAAGAACAGGTCGTGCTGGTGATAAGGATGGAGTTGCTTACACTCTTATAACTCAAAAAGAAGCACGGTTTGCTGGTGAATTGGTTAATAGCTTAGTTGCTGCTGGTCAGAATGTGTCCACGGAGTTGATGGATCTTGCTATGAAGGATGGGCGATTCAGGTCAAAACGGGATGCAAGAAAAGGAGGTGGGAGAAAAGGCAAAGGCAGAGGTGGGGGTGCGAGTGGCAAAGGTGTGCGCGGAGTGGATTTTGGCTTGGGCATTGGATATAATACAGACTCAAACAATTCCTCATCTAACACAGTTCCAGGTCGGTCTGCTGCTGTAAATTCTCTGCGAACAGGAATGATGTCCCAATTTAAGAGTAGCTTCGTTGCTGCATCATCAAACTCCCAAAATGAAGGATTCAGTAATAATACAAGCATGGCTGTTAATAAGAGACCAACACTCGCTGGCTTTGTATCTGGTGGATCAATTGGCGGTGATATAAATACTCATCAGCAAACCGCTTCATACAATCCTGCTCCATCAGCCGTAAATTCCTCTAGTCAAAGTTCTGGAGTAAATCCTGGTCAGAACAGCACGAACAGTTCTAAACCTAGAGAAAGGCGAAGGCCATCAGGTTGGGATAGATAG 2337 0.4335 MSKRKFGFEGFGINRQSTYSFERSQPAQRLYVPPSSRKSHDNYEDNDLDNIEYDDDAREEKEESNNNNNGGGGGGGEEEEEIDPLDAFMEGIHEEMKSAPPPKLKEKVEDRYKDDLEDDPMESFLRAKKDLGLTLASEALHAGYDSDEEVYAAAKAVDAGLIDYDSDDNPIVLDKKKIEPIAPLDHTEIDYEPFNKDFYEESPSISGMSEQDVTDYRKSLAIRVSGFEVPKPVKTFEDCGFASQIMGAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFAKAHGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMLRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDSEKLPWLLEKLPEMIDQGDTLVFASKKATVDEIEAQLGQRGFKVAALHGDKDQSSRMDILQKFKSGTYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLVAAGQNVSTELMDLAMKDGRFRSKRDARKGGGRKGKGRGGGASGKGVRGVDFGLGIGYNTDSNNSSSNTVPGRSAAVNSLRTGMMSQFKSSFVAASSNSQNEGFSNNTSMAVNKRPTLAGFVSGGSIGGDINTHQQTASYNPAPSAVNSSSQSSGVNPGQNSTNSSKPRERRRPSGWDR* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4705 778 MobiDBLite consensus disorder prediction 728 764 - -
Mal3g4705 778 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 386 394 IPR000629 -
Mal3g4705 778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 443 IPR027417 -
Mal3g4705 778 Pfam Helicase conserved C-terminal domain 469 574 IPR001650 -
Mal3g4705 778 MobiDBLite consensus disorder prediction 13 32 - -
Mal3g4705 778 CDD SF2_C_DEAD 452 584 - -
Mal3g4705 778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 383 614 IPR027417 -
Mal3g4705 778 SMART helicmild6 493 574 IPR001650 -
Mal3g4705 778 SMART ultradead3 253 455 IPR014001 -
Mal3g4705 778 MobiDBLite consensus disorder prediction 618 645 - -
Mal3g4705 778 Pfam DEAD/DEAH box helicase 258 429 IPR011545 GO:0003676|GO:0005524
Mal3g4705 778 MobiDBLite consensus disorder prediction 1 83 - -
Mal3g4705 778 Gene3D - 197 441 IPR027417 -
Mal3g4705 778 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 24 45 662 - -
Mal3g4705 778 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 265 440 IPR014001 -
Mal3g4705 778 MobiDBLite consensus disorder prediction 728 778 - -
Mal3g4705 778 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 45 662 - -
Mal3g4705 778 CDD DEADc_DDX42 245 441 - -
Mal3g4705 778 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 465 614 IPR001650 -
Mal3g4705 778 Gene3D - 442 618 IPR027417 -
Mal3g4705 778 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 234 262 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4705 Mal-Chr3 126908177 126912126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4705 234 590 Eukaryotic Initiation Factors Gene Family AT3G13920 35.278 1.32e-62 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4705 K12835 - gmx:100814854 1273.46