Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal3g4702 | ATGGATTATCGTTCACCACCTCCTGATATAAACATAGAACCTGAGTATTGTCCACAAGCTGTGTTTGATTGGTATCACTTACCAGGACTAAAAGATCGTAGAAAGGACTTGGCTTTGAAAGCAAAACAACATCTTCTTTTTTTGGGTTGGAGGTTTTGGTACATTGAAAAAAATTGTAGGTGGGAAATGCGTTATACTTCTCCTAACAATGCCAAAAATTATGCTACTCTTAGAAAAGCCTGTGAGGTTTGCATTGAACAAGGAGGGTGTTCCCTCAAACACCCTTCAACTGCAGCACCAGTAGCAGTAAAAACAGCAATTTCTTCGTCTCCATTACATTTGAAAAAGCGATCGAGAGAATCCGATGAAACAGCAGAAGCAACAATTGCTTTGTCTCCATTACAATCGAAAAAGCGACAGAGAGAATCCGAGGATGCAGCAGCAACATCAATTTATTCGTCTCCATTACAGTTGAAAGAGCAACCGAGAGAATCTGTGGAGGAAGCAGCAGCAGCAACAACAATTTCTTCGGAATCCGATGAATCAACTTCTGATGAGGATTCTGAAGCCTCTAGTTCAAGTTCTGAATCAACGTCTGACGAGGATTCTCAAGCCTCTAGTTCAAGTTCTGAATCAACTTCTGACGAGGATTCTGAAGCCTCTGGTTCCAGTTTTCTTAAAAAAGATATGGTTACTACAGTCTCAACATCAATGGAAAATGAGAAGCATGTGAGTGAATCTGAACCAGAAGATACTAAGGTTTTAAAAATGAGAAAAATAGAGAAGAATTTGGAGGATTGTGGTAGAAGAGGGAAAGTTTTAAAGATGAGTATAATGGAGAAGAATTCAGAGGGTTGTGGTAAGAGAGGGAAGGTATTAAAGAGGGGAGGCATAAGGGAAAGGTATTCACTTGTTTCTTGGTTGATAAAGAATCAAGTTTTGGTTTCAGGGACTTATGTGTTCTGTCGTGGTAGTAACAATATTGTCAAAAGAGGGAGTATATTTTGTGACGGTATAGTTTGTGATTGTTGTCGTGTTAATTTCACTGTCACTGGATTTGAGGCTCATGCTGGTTGTACAAGACATAGACCATCCACTAGTATCTTGTTGGAAGACGGAAGGTCGTTGTTGGAGTGTCAAAGGGAAGCTTGGAGTTCGCGTGATCAAAAGGGGAATCATTGTATTGACGAAGCAAATTCTGAAGTAGGGAATCATTGTGTTGCCGAAGCAAATTCTGAAGCAAATAACAATAATGTTTGTTCTATTTCAAATTCTGAAGTAGGGAATCATTGTGTTGCCGAAGCAAATTCTGAAGCAAATAACGATAATGTTTGTTCTATTTGTAATTTTGGAGGTGACATAGTACTATGTGATCGATGTCCTTCTGCATTCCACCTTGGTTGTTTAGGTCTTGATCGAGTTCCAGATGGTGATTGGTTCTGTCCAACTTGTTGTTGCAAAATATGCTATCAACCCAAATGCAAACAAGAATGTGCAGATGGCAATGATAACAATATTCTTGTTTGTGTTCAATGTGAGCAAAAATTTCACTTTGGCTGTGTAAAAGCTGTAAAATTTGGATCGAGTCACATGGAGAGCAATGTTAAAAAGAAGAATTGGTTTTGCAGTGTGGTTTGTGGGAGCATGTTCTTATGTCTAAAGAAGCTATTGGGGAATCCAATTAAGGTTGCAGATAACATAACTTGGACATTGTTGAAGAATATGACTAGTGATGATGATGGTGGAGATTTTACTTCTAACGCGTTTAGTCAAAAGAAACATAAGTTGAATGTAGCTCTTGGTGTATTGTATGAGAGTTTTGATCCAACTATTGATGCTTTATCTGGAAGAGAATTGATGAAAGATGTTGTTTTTAGTAGAGGCTCAGAACATAAACGCTTGAACTTCTGTGGTTTCTATAATGTGATTTTGGAGAAAATGGGGAAAGTGATTTCGGTGGCAACTATACGGATTTATGGTCAAAAGGTTGCAGAGATAGCTTTTGTGGCTACCAAGGGACAATATCGAGGACAAGGAATGTGTCGTTTGTTGATGGATGAGCTTGAGGAACAATTGACTCGCTTAGGAGTACAGAGATTGGTTTTGCATTCATCTGAATATGCTATAAACACTTGGACAAAATCGTTTGGTTTTGCTAGGATGACGAGTAAAGACAAGTGTCAATTTATTGACAATACTTTCTTAGAATTTGACAACAGTATTATGTGTCTTAAACCACTCAACAGACCTATATGGCCTTGCATTGCTTGA | 2271 | 0.3844 | MDYRSPPPDINIEPEYCPQAVFDWYHLPGLKDRRKDLALKAKQHLLFLGWRFWYIEKNCRWEMRYTSPNNAKNYATLRKACEVCIEQGGCSLKHPSTAAPVAVKTAISSSPLHLKKRSRESDETAEATIALSPLQSKKRQRESEDAAATSIYSSPLQLKEQPRESVEEAAAATTISSESDESTSDEDSEASSSSSESTSDEDSQASSSSSESTSDEDSEASGSSFLKKDMVTTVSTSMENEKHVSESEPEDTKVLKMRKIEKNLEDCGRRGKVLKMSIMEKNSEGCGKRGKVLKRGGIRERYSLVSWLIKNQVLVSGTYVFCRGSNNIVKRGSIFCDGIVCDCCRVNFTVTGFEAHAGCTRHRPSTSILLEDGRSLLECQREAWSSRDQKGNHCIDEANSEVGNHCVAEANSEANNNNVCSISNSEVGNHCVAEANSEANNDNVCSICNFGGDIVLCDRCPSAFHLGCLGLDRVPDGDWFCPTCCCKICYQPKCKQECADGNDNNILVCVQCEQKFHFGCVKAVKFGSSHMESNVKKKNWFCSVVCGSMFLCLKKLLGNPIKVADNITWTLLKNMTSDDDGGDFTSNAFSQKKHKLNVALGVLYESFDPTIDALSGRELMKDVVFSRGSEHKRLNFCGFYNVILEKMGKVISVATIRIYGQKVAEIAFVATKGQYRGQGMCRLLMDELEEQLTRLGVQRLVLHSSEYAINTWTKSFGFARMTSKDKCQFIDNTFLEFDNSIMCLKPLNRPIWPCIA* | 757 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal3g4702 | 756 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 602 | 740 | IPR000182 | GO:0016407 | |
| Mal3g4702 | 756 | Pfam | PHD-finger | 444 | 486 | IPR019787 | - | |
| Mal3g4702 | 756 | Gene3D | - | 625 | 732 | - | - | |
| Mal3g4702 | 756 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 642 | 732 | IPR016181 | - | |
| Mal3g4702 | 756 | CDD | NAT_SF | 642 | 703 | - | - | |
| Mal3g4702 | 756 | SMART | PHD_3 | 493 | 546 | IPR001965 | - | |
| Mal3g4702 | 756 | SMART | PHD_3 | 444 | 485 | IPR001965 | - | |
| Mal3g4702 | 756 | MobiDBLite | consensus disorder prediction | 112 | 229 | - | - | |
| Mal3g4702 | 756 | ProSiteProfiles | Zinc finger PHD-type profile. | 442 | 487 | IPR019787 | - | |
| Mal3g4702 | 756 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 434 | 486 | IPR013083 | - | |
| Mal3g4702 | 756 | PANTHER | AGENET DOMAIN-CONTAINING PROTEIN-RELATED | 9 | 750 | - | - | |
| Mal3g4702 | 756 | PANTHER | DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED | 9 | 750 | - | - | |
| Mal3g4702 | 756 | Pfam | Acetyltransferase (GNAT) family | 631 | 718 | IPR000182 | GO:0016407 | |
| Mal3g4702 | 756 | MobiDBLite | consensus disorder prediction | 188 | 229 | - | - | |
| Mal3g4702 | 756 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 487 | 548 | IPR013083 | - | |
| Mal3g4702 | 756 | SUPERFAMILY | FYVE/PHD zinc finger | 435 | 495 | IPR011011 | - | |
| Mal3g4702 | 756 | MobiDBLite | consensus disorder prediction | 146 | 160 | - | - | |
| Mal3g4702 | 756 | Pfam | Tify domain binding domain | 332 | 383 | IPR032308 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal3g4702 | Mal-Chr3 | 126870378 | 126872648 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal3g4702 | 303 | 695 | PHD Transcription Factor Family | AT5G58610 | 37.028 | 4.21e-80 | 274 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | PHD | Mal3g4702 | Acetyltransf_1 | 1.6e-10 | CL0257 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal3g4702 | - | - | mtr:MTR_3g103110 | 1054.66 |