Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4696 ATGTCAGTAGTATCAAAAAATGAATCATTACAAAGTGAGGGAAATGTTCTTTCTTCAAGAATGAATAATCCTTTGTGTAAATTCTATGGTTCCATGCCTCAAGTTTCAGAAGAGGGAGAGCCACCAGTTGTGAAAAGTATCAAGCTGCCATACATCAACAGATTACCTCCATTTACGTTTTGGACACATTTAGCCAGAAATGAAAAAATGACTGAAGATCAATCGGTTTCTAAAAAAAGAAATATATCTTATGATCATCATAGAGGTGAAACATTAGTTTGCAGTGATACTGAAGAAGAGCCAAAAGAGCATAAGGAAAAGGAAGTTAAACGCGACTTTTCTGAGGGTGAAGATAAATTTATTAGGATGGTATTTGATGAATATGGTTTAACTGAGGAGGTGTTAAGTATTGTTAAGGATGTTATCGGCGGTACCAATGCCGAAATCCAGGAGCGGTATAAAAATATCAAAGAAAATGACCAAAATTCTGATGATCATAGAGAAAGTGAATCTCACACTGATGATTTTTTGAACAGAAGCTTGAGTGCCTCTTTAGATATTTTTGACAACCTTTATTGTCGCCAGTGCATGATCTTTGATTGTGCTTTGCACGGTTGTTCTCAGAAGATAATATATCCAAATGAAAAGCAACCAGTTTGGACAGGACCAGAAGGTCCCAGAAAACCATGTGGCGATCATTGTTACCTCCATGATAAAGATGCCACAATTAGTGATTGTGTCAGGGGCCTAAATTTGGATGCTTGCAATGAAGAAAAAAATGTTACGGATGAAACAGAATCGAAGCAGTTGTCTAACTCAATGGAAGGACAAGTTGAGGAGGAGTCTAGTGATTCAAATTGGAAACTTTTGGAAAAAGAATTGTATTTGAAGGGAATAGAAATGTTTGGGAGAAATAGTTGCCTTGTATCTCGGAACTTACTTTTTAATTTGAAGACTTGCAAGGAAGTTGCTAAATACATGTATGCTGAAGAGTCAATGCAACATAGAACCATGGACGAAAATGGAAAATCTGATGCAATGTGCATTGACAATGAGATGCCATCAAGGTCAAGGTCTATGTCAAGAAAGAGCAAAGCTAAGAAATATTCTTCAAAATCTGCTGGAGTCCCATCTGCATGGAAAAGAATTAGTGATGGGAAAAACAAACTGTATAAGCAGTATAAACCTTGTGAATGCGAGGGAATGTGTGGAAAGCAATGTCCATGCCTTCTTAATAGATTTTGCTGTGAAAAATATTGTGGTTGTTCAAAGCTATGCAAAAATCGATTTAGAGGGTGTCATTGTACTAAGAGTCAATGTAGAAGTCGACATTGTCCATGTTTTGCAGCATCAAGGGAATGTGACCCAGATGTATGTCAAAATTGTTGGGTTAGTTGTGGAGATGGTTCATTAGGAAAGTCGTCACATCGTGGAGAGGATCAATGTGAAAATATGATGATGCTTTTAAATAAACAACAAAAGATTCTTTGGGCAAGGTCTGATGTTGCTGGATGGGGAGCCTTTTTAAAGAACCCAGCAAATAAAAATGATTTTCTAGGAGAGTACACTGGTGAACTTCTCTCTCAAGAAGAAGCTGAGAAGCGCGGAAAATTTTATGATCGTGCAGACTTTTCGTACCTTTTTAACTTGAATGATACGTATTGCCTTGATGCTTATCGCAAAGGAAACAAGTTGAAATTTGCAAATCACTCATCAAAACCCAATTGTTATGCAAGGGTTATGCTTATTAATGGAGATCATCGAGTAGGAATATTTGCAAAGGAACGCATTGAAGCTGGTGAGGAGCTTTTCTATGATTACGGGTATGATGCAAGTAGTCAACCACCATGGCTTCAGAAACTTCTAGATGATGATAAGGGTTCCAAGAAAAATGATGATCCAACATTTTCTCAAGGAAAAGCCAAGAAACATTGCTCTCATTGA 1944 0.3724 MSVVSKNESLQSEGNVLSSRMNNPLCKFYGSMPQVSEEGEPPVVKSIKLPYINRLPPFTFWTHLARNEKMTEDQSVSKKRNISYDHHRGETLVCSDTEEEPKEHKEKEVKRDFSEGEDKFIRMVFDEYGLTEEVLSIVKDVIGGTNAEIQERYKNIKENDQNSDDHRESESHTDDFLNRSLSASLDIFDNLYCRQCMIFDCALHGCSQKIIYPNEKQPVWTGPEGPRKPCGDHCYLHDKDATISDCVRGLNLDACNEEKNVTDETESKQLSNSMEGQVEEESSDSNWKLLEKELYLKGIEMFGRNSCLVSRNLLFNLKTCKEVAKYMYAEESMQHRTMDENGKSDAMCIDNEMPSRSRSMSRKSKAKKYSSKSAGVPSAWKRISDGKNKLYKQYKPCECEGMCGKQCPCLLNRFCCEKYCGCSKLCKNRFRGCHCTKSQCRSRHCPCFAASRECDPDVCQNCWVSCGDGSLGKSSHRGEDQCENMMMLLNKQQKILWARSDVAGWGAFLKNPANKNDFLGEYTGELLSQEEAEKRGKFYDRADFSYLFNLNDTYCLDAYRKGNKLKFANHSSKPNCYARVMLINGDHRVGIFAKERIEAGEELFYDYGYDASSQPPWLQKLLDDDKGSKKNDDPTFSQGKAKKHCSH* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4696 647 ProSiteProfiles SET domain profile. 493 608 IPR001214 GO:0005515
Mal3g4696 647 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 11 261 - -
Mal3g4696 647 MobiDBLite consensus disorder prediction 622 640 - -
Mal3g4696 647 CDD SET_EZH 493 609 - -
Mal3g4696 647 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 14 647 IPR025778 GO:0031519
Mal3g4696 647 SMART CXC_2 428 465 IPR033467 -
Mal3g4696 647 Pfam CXC domain 432 463 IPR041355 -
Mal3g4696 647 SMART set_7 493 614 IPR001214 GO:0005515
Mal3g4696 647 MobiDBLite consensus disorder prediction 618 647 - -
Mal3g4696 647 Pfam SET domain 504 608 IPR001214 GO:0005515
Mal3g4696 647 Gene3D SET domain 394 610 IPR046341 -
Mal3g4696 647 ProSiteProfiles CXC domain profile. 380 479 IPR026489 -
Mal3g4696 647 SUPERFAMILY SET domain 390 611 IPR046341 -
Mal3g4696 647 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 11 261 IPR045318 GO:0006338|GO:0018024
Mal3g4696 647 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 264 644 IPR045318 GO:0006338|GO:0018024
Mal3g4696 647 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 264 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4696 Mal-Chr3 126795135 126799487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4696 482 608 C2H2 Transcription Factor Family AT2G23740 31.944 9.65e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mal3g4696 SET 4.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4696 - K11430 mtr:MTR_7g109560 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4696 3 126795135 126799487 Mal1g1662 1 21718655 21726972 PCT