Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4691 ATGGCTTCGATTCAACGTGGGGTGAGTTCAAGATCTGACGGTGTGGATGGAATGATGGACGATAGAAAAAGGAAAAGGTTGATTTCAAATCGCGAATCCGCAAGACGATCGCGGATGAGGAAGCTGAAGCAGTTGGAGGATTTTCGTGATGAAGTGAACAAGTTACAATCTGAGAATCAACAATTGTTGGAGGACATTAAGGCGAAAGAACAAGCAAACATTGCAAATGAAGCTGCAAATGGCATCCTTAAAGCTCAGACAAAGGAATTGACAGATCAATTGCGGTTTCTCAACTCGATCATTGAAGAAGCTCCCAGAGAAAAAAGTGGAATTTCTGCTAAGAATCCGAAGATTCCAGATCCGCAACTGAAACTGTGGCAGATTCCTTATCCAAATCAAGCAATTATGGCGTCTTCAAATTGGTTCTTGCATTGA 435 0.4207 MASIQRGVSSRSDGVDGMMDDRKRKRLISNRESARRSRMRKLKQLEDFRDEVNKLQSENQQLLEDIKAKEQANIANEAANGILKAQTKELTDQLRFLNSIIEEAPREKSGISAKNPKIPDPQLKLWQIPYPNQAIMASSNWFLH* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4691 144 MobiDBLite consensus disorder prediction 15 39 - -
Mal3g4691 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 20 67 IPR004827 GO:0003700|GO:0006355
Mal3g4691 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 141 - -
Mal3g4691 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 25 40 IPR004827 GO:0003700|GO:0006355
Mal3g4691 144 CDD bZIP_plant_GBF1 23 72 IPR045314 GO:0003700|GO:0006355
Mal3g4691 144 SMART brlzneu 18 89 IPR004827 GO:0003700|GO:0006355
Mal3g4691 144 Coils Coil 38 72 - -
Mal3g4691 144 MobiDBLite consensus disorder prediction 1 39 - -
Mal3g4691 144 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 141 - -
Mal3g4691 144 SUPERFAMILY Leucine zipper domain 22 71 IPR046347 GO:0003700|GO:0006355
Mal3g4691 144 Pfam bZIP transcription factor 21 68 IPR004827 GO:0003700|GO:0006355
Mal3g4691 144 Gene3D - 21 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4691 Mal-Chr3 126748927 126749361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4691 1 142 bZIP Transcription Factor Family AT3G62420 45.517 1.12e-32 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal3g4691 bZIP_1 2.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4691 K25786 - gmx:780550 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4691 3 126748927 126749361 Mal1g1667 1 21756474 21756896 PCT