Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal3g4690 | ATGAATAATGATGAAGAAAAGAAGAAAGAAGAAGAAGATGCTCTAGCGAGAGAGTTTCTTTCCAATTTCGCCGACGCTAATGGCGAAGCCAAATACCTCAGCATACTGCAAGATGTTGCAAACCACAACACTCGATCTATTGAAATTGATCTCGAAGACTTAATCAACTACAAAGATCTAGATGAGGAATTTCTGAGCCGTGTTACTGAGAATACTCGAAGGTATATTGGGATTTTCGCTGATGCAATCGATGAACTCATGCCGGAGCCGACCCAGTCATTTGTGGATGATGATCATGACATTTTGATGACTCAGAGATCTGATGAAGGAACTGAAGGTGCTGATGGTTCTGATCCGCACCAGAAGATGCCTCCTGAAATCAGACGCTTCTTTGAGGTTTATATCAGAGCATCTTCGAATGGACGGCCATTTACAATTAGGGAGGTGAAGGCTTCAAACATTGGGCAGCTTGTAAGGATAGCTGGTATTGTTACGCGTTGCTCCGATGTCAAACCATTGATGCAGGTGGCTGTCTACACCTGTGAGGATTGTGGCTTTGAAATTTATCAGGAAGTAACAGCTAGAGTATTCATGCCTTTGTTTGAGTGTCCATCAAAGCGCTGCGTTACGAACAAGAGTAAGGGTAACGTCATCCTTCAACTGAGAGCGTCAAAGTTTTTGAGATTTCAAGAGGCCAAAATTCAAGAGTTAGCTGAACATGTTCCAAAGGGTCATATTCCACGAACAATGACTGTTCATCTTAGGGGAGAACTCACTAGAAAGGTAGTTCCAGGTGACGTCGTTGAACTATCTGGGATTTTTCTTCCTATACCTTACGTTGGTTTTAGAGCAATGCGTGCTGGCCTAGTTGCTGACACATACTTAGAGGCCATGTCTGTGACTCATTTTAAGAAAAAATATGAAGAATATGAACTTAGAGGAGATGAGGAAGAGCAGATCAAACGTTTAGCAGAAGATGGTGATATCTATGATAAGTTGGCACGATCATTAGCTCCTGAAATTTTTGGACATGAAGATATCAAAAAAGCATTGCTGCTGCTTCTTGTTGGTGCTCCCCATCGGACATTGAAAGATGGGATGAAGATTAGAGGAGATCTACATATATGTTTGATGGGTGATCCTGGTGTTGCCAAGAGTCAGCTTCTTAAACACATAATCAATGTAGCACCCAGGGGTGTATACACCACTGGCAAAGGAAGTAGTGGAGTTGGTCTAACTGCTGCTGTTCAGAAAGATCCGGTGACAAATGAGATGGTTTTAGAGGGTGGAGCATTGGTGCTATCAGATATGGGTATATGTGCCATTGATGAGTTTGACAAGATGGATGAATCAGATCGTACATCTATTCATGAAGTTATGGAACAACAGACTGTTAGCATTGCCAAGGCTGGGATCACTACGTCACTGAATGCAAGGACTGCTGTCCTTGCTGCAGCTAATCCAGCATGGGGAAGATATGATCTAAGAAGAACTCCTGCTGAGAATATTAATCTTCCACCTGCTCTGCTATCAAGGTTTGATCTGCTGTGGTTAATCCTTGATCGAGCTGATATGGATAATGATCTTGAAATGGCAAGACATGTTGTCTATGTCCATCAAAATAAAGAGTCTCCCGCACTAGGATTCACTCCTCTTGAACCATCTCTTCTCCGTGCATACATATCAACTGCTAGAAGATTGTCTCCTACTGTCCCAAGGGAACTGGAAGAGTATATTGCTAGTGCTTACTCCAGCATTCGTCAAGAAGAAGCAAAGTCCACCACTCCACATTCTTATACGACTGTCAGGACATTGCTCAGTATTCTCCGCATATCAGCTGCCCTAGCAAGACTCCGTTTTTCTGAAACTGTTGCTCAGAGTGATGTGGACGAGGCATTGAGGTTAATGCAGATGTCAAAATTCTCTTTGTACTCTGATGACCGTCAAAAATCTGGCCTCGATGCTATATCTGATATTTATTCCATACTTCGTGATGAAGCTGCTAGAAGTAGCCGAATGGATGTCAACTATCGCGATGCATTGAATTGGATATCTCGGAAGGGGTACAGTGAAGCCCAGTTGAAAGAGTGTTTAGAGGAGTATGCAGCATTGAATGTATGGCTGATACATCCTCAAACCTTTGATATAAAATTTATCGATGCTTGA | 2166 | 0.4252 | MNNDEEKKKEEEDALAREFLSNFADANGEAKYLSILQDVANHNTRSIEIDLEDLINYKDLDEEFLSRVTENTRRYIGIFADAIDELMPEPTQSFVDDDHDILMTQRSDEGTEGADGSDPHQKMPPEIRRFFEVYIRASSNGRPFTIREVKASNIGQLVRIAGIVTRCSDVKPLMQVAVYTCEDCGFEIYQEVTARVFMPLFECPSKRCVTNKSKGNVILQLRASKFLRFQEAKIQELAEHVPKGHIPRTMTVHLRGELTRKVVPGDVVELSGIFLPIPYVGFRAMRAGLVADTYLEAMSVTHFKKKYEEYELRGDEEEQIKRLAEDGDIYDKLARSLAPEIFGHEDIKKALLLLLVGAPHRTLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGKGSSGVGLTAAVQKDPVTNEMVLEGGALVLSDMGICAIDEFDKMDESDRTSIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDNDLEMARHVVYVHQNKESPALGFTPLEPSLLRAYISTARRLSPTVPRELEEYIASAYSSIRQEEAKSTTPHSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAISDIYSILRDEAARSSRMDVNYRDALNWISRKGYSEAQLKECLEEYAALNVWLIHPQTFDIKFIDA* | 722 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal3g4690 | 721 | Gene3D | - | 173 | 227 | - | - | |
Mal3g4690 | 721 | Gene3D | - | 314 | 646 | IPR027417 | - | |
Mal3g4690 | 721 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 39 | 699 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Mal3g4690 | 721 | Pfam | MCM N-terminal domain | 17 | 135 | IPR027925 | - | |
Mal3g4690 | 721 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 458 | 471 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Mal3g4690 | 721 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 370 | 385 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Mal3g4690 | 721 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 482 | 494 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Mal3g4690 | 721 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 509 | 517 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Mal3g4690 | 721 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 430 | 444 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Mal3g4690 | 721 | Gene3D | - | 5 | 104 | - | - | |
Mal3g4690 | 721 | SMART | mcm | 142 | 641 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Mal3g4690 | 721 | PRINTS | Mini-chromosome maintenance (MCM) protein 7 signature | 123 | 135 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Mal3g4690 | 721 | PRINTS | Mini-chromosome maintenance (MCM) protein 7 signature | 161 | 172 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Mal3g4690 | 721 | PRINTS | Mini-chromosome maintenance (MCM) protein 7 signature | 196 | 208 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Mal3g4690 | 721 | PRINTS | Mini-chromosome maintenance (MCM) protein 7 signature | 288 | 298 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Mal3g4690 | 721 | PRINTS | Mini-chromosome maintenance (MCM) protein 7 signature | 179 | 190 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Mal3g4690 | 721 | ProSiteProfiles | MCM family domain profile. | 329 | 535 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Mal3g4690 | 721 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM7 | 39 | 699 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Mal3g4690 | 721 | ProSitePatterns | MCM family signature. | 438 | 446 | IPR018525 | GO:0003677|GO:0005524|GO:0006260 | |
Mal3g4690 | 721 | Gene3D | - | 146 | 274 | IPR012340 | - | |
Mal3g4690 | 721 | Pfam | MCM P-loop domain | 317 | 539 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Mal3g4690 | 721 | SUPERFAMILY | Nucleic acid-binding proteins | 16 | 297 | IPR012340 | - | |
Mal3g4690 | 721 | CDD | MCM7 | 332 | 639 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Mal3g4690 | 721 | Pfam | MCM AAA-lid domain | 556 | 639 | IPR041562 | - | |
Mal3g4690 | 721 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 339 | 650 | IPR027417 | - | |
Mal3g4690 | 721 | Pfam | MCM OB domain | 146 | 276 | IPR033762 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal3g4690 | Mal-Chr3 | 126739180 | 126748839 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal3g4690 | 12 | 719 | Core DNA Replication Machinery Family | AT4G02060 | 83.333 | 0.0 | 1246 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal3g4690 | K02210 | - | gmx:100802903 | 1280.39 |