Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4662 ATGGTGTCGCTCAAGTTGCAAAAGCGTCTTGCTTCAAGCGTCCTCAAGTGCGGTCGTGGCAAAGTTTGGCTTGATCCAAATGAAGTCAATGAAATCTCTATGGCTAATTCTCGCCAAAACATAAGGAAGCTGGTTAAGGATGGGTTTATCATCAGGAAACCCACCAAGATTCACTCCAGATCACGTGCTCGTAGAATGAAGGAAGCTAAGAGGAAGGGACGACACTCTGGATATGGTAAGAGGAAGGGTACCAGAGAGGCAAGGCTTCCCACAAAGATCCTTTGGATGAGGAGAATGCGTGTTCTCAGACGTTTGCTCCGCAAGTACCGGGAGGCTAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTTAAGGGTAATGTGTTTAAGAATAAGAGAGTTCTGATGGAGAGCATTCACAAGTCCAAAGCTGAGAAGGCCAGAGAGAAGACCTTGTCTGACCAGTTTGAGGCCAAACGTGCCAAGAACAAGGCCAGCCGAGAAAGGAAGCATGCCAGGAGGGAGGAGCGTTTTGCTCAAGGTCCTGGAGGAGAGAAGCCAGCAGATGCTCCTAGTGCTCCACCTGCTGCAGCAGCAGCAGCAGCAGCAAAGCAAACTCAACCGACAAAGAAATCCAAGAAGGCAGTGGCAGTCTGA 666 0.4895 MVSLKLQKRLASSVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERFAQGPGGEKPADAPSAPPAAAAAAAAKQTQPTKKSKKAVAV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4662 221 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Mal3g4662 221 Gene3D - 57 185 - -
Mal3g4662 221 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mal3g4662 221 MobiDBLite consensus disorder prediction 144 185 - -
Mal3g4662 221 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mal3g4662 221 MobiDBLite consensus disorder prediction 57 79 - -
Mal3g4662 221 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Mal3g4662 221 PANTHER 60S RIBOSOMAL PROTEIN L19 1 217 IPR039547 GO:0003723|GO:0003735|GO:0022625
Mal3g4662 221 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mal3g4662 221 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Mal3g4662 221 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Mal3g4662 221 PANTHER RIBOSOMAL PROTEIN L19 1 217 - -
Mal3g4662 221 MobiDBLite consensus disorder prediction 144 221 - -
Mal3g4662 221 MobiDBLite consensus disorder prediction 57 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4662 Mal-Chr3 126456270 126458070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4662 1 197 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 86.500 1.42e-125 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4662 K02885 - qsu:111984851 359.377