Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4656 ATGAGAGGGAAAACAGCACCATTGCTGGCTCTCACACCAATTTTAGTTCTACTATTTTCAGCAACAGCAACACCACAAACAAACAACATCCAAGTAGCTCATTCAACATGCGAAGGAACACTCTACCCAGACCTTTGTGTCTCAACCTTATCCACTCTTCCAGATCTTACCTCAAAAACAGTACCACAAATGATTTGCTCTGTTCTCAACAATACCATTAAAGAAGTTAAATTATCATCTTCCAACTGCACCGGCCTCCGAATTCGCGGCAGAAGTGTACAAAGCATAATTGACCAAAGAGCACTTGATGATTGTGTCAATTTATTCGACACCACAATTGAAGAACTCAAAACAACCATTTCTGATCTCTCTCAAACTCAAACCACAATAGCTTATACTAGTAAGCGTGACTGTCAAACTCTGCTTAGTGGTGCAATGACCAATGTGTACACATGTTTGGATGGTTTTGCTTATAGTAAATCGAAATTGAGAAAAAAAATTGAGGCTAAGTTGAATGATATTTCTAGTCATGTTAGTAATTCACTTGCCATGTTGAAGAAAGTTCCTGGAGTGAAGACAAAAGCTTCTGAGTCTGAAACTTTCCCTGAATATGGTAAAGTGAAAGACGGGTTTCCGACGTGGGTGTCACGGAAAGATAGGAAGCTATTACAAACTGCGGTGAATCAAACTAAGTTTGATCTTGTGGTTGCTAAAGATGGCACTGGCAACTTTGCCACTATAGGAGAAGCAATTGCTGCAGCTCCAAACTCTAGCGCAATTAGATTTGTGATTCACATAAAAGCGGGGGCTTATTTTGAGAATGTGGATGTGATAAGGAAGAAGACCAATTTGATGTTAGTTGGAGATGGGATTGGAAAGACTGTTGTGAAGGCCAGTAGAAATGTTGTAGACGGGTGGACCACTTTCCAATCAGCTACTTTCGCTGTTGTGGGAGACAGATTCATAGCCAAAGGTATAACCTTTGAGAACTCAGCCGGACCAAGCAAACACCAAGCTGTAGCCCTAAGAAGCGGGGCCGATTTTTCAGCCTTCTACCAATGCAGCTTTGTTGCTTACCAAGACACTCTCTATGTCCACTCCCTCCGTCAATTCTACCGCGAATGTGACGTTTATGGCACCGTAGACTTCATCTTTGGCAATGCCGCGGTGGTATTCCAAAACTGCAACCTATATGCACGCAAACCCGATCCAAAGCAAAAGAATTTGTTCACTGCACAAGGTAGAGAAGATCCTAACCAAAACACTGGAATTTCAATCTTGAACTGTAAAATTGCGGCCGCTGCAGATTTGATTCCGGTACAATCAACGTTCAAGAGTTACCTCGGCCGTCCTTGGAAAAATTATTCAAGAACTGTTTATCTGAATTCTTTTATTGATGATTTGATAGATCCAGCAGGGTGGTTAGAGTGGGATGGAACGTTTGCTTTGAGTACATTGTTCTATGGTGAGTATAAGAATAGAGGTCCTGGTTCGAATACAAGTGCTAGAGTTAAGTGGCCTGGTTATAAAGTTATCACTAACACCACTGAGGCAAGCCAATTCACTGTTAGGCAGTTTATACAAGGCGGTGAGTGGTTGAATCCCACAGGCATTCCATTTTTCCTTGATTTGAGTTGA 1638 0.4176 MRGKTAPLLALTPILVLLFSATATPQTNNIQVAHSTCEGTLYPDLCVSTLSTLPDLTSKTVPQMICSVLNNTIKEVKLSSSNCTGLRIRGRSVQSIIDQRALDDCVNLFDTTIEELKTTISDLSQTQTTIAYTSKRDCQTLLSGAMTNVYTCLDGFAYSKSKLRKKIEAKLNDISSHVSNSLAMLKKVPGVKTKASESETFPEYGKVKDGFPTWVSRKDRKLLQTAVNQTKFDLVVAKDGTGNFATIGEAIAAAPNSSAIRFVIHIKAGAYFENVDVIRKKTNLMLVGDGIGKTVVKASRNVVDGWTTFQSATFAVVGDRFIAKGITFENSAGPSKHQAVALRSGADFSAFYQCSFVAYQDTLYVHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYARKPDPKQKNLFTAQGREDPNQNTGISILNCKIAAAADLIPVQSTFKSYLGRPWKNYSRTVYLNSFIDDLIDPAGWLEWDGTFALSTLFYGEYKNRGPGSNTSARVKWPGYKVITNTTEASQFTVRQFIQGGEWLNPTGIPFFLDLS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4656 545 SUPERFAMILY Pectin lyase-like 230 542 IPR011050 -
Mal3g4656 545 Pfam Pectinesterase 233 529 IPR000070 GO:0030599|GO:0042545
Mal3g4656 545 CDD PMEI-like_3 35 190 - -
Mal3g4656 545 PANTHER PECTINESTERASE 29 543 - -
Mal3g4656 545 Pfam Plant invertase/pectin methylesterase inhibitor 34 184 IPR006501 GO:0004857
Mal3g4656 545 Gene3D - 227 544 IPR012334 -
Mal3g4656 545 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 188 IPR035513 -
Mal3g4656 545 SMART PMEI_2 28 184 IPR006501 GO:0004857
Mal3g4656 545 PANTHER PECTINESTERASE 29 543 - -
Mal3g4656 545 ProSitePatterns Pectinesterase signature 2. 377 386 IPR033131 -
Mal3g4656 545 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 190 IPR035513 -
Mal3g4656 545 TIGRFAM PME_inhib: pectinesterase inhibitor domain 14 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4656 Mal-Chr3 126400073 126405412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4656 57 544 Carbohydrate Esterase AT4G02320 56.175 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4656 K01051 - gmx:100813592 827.394