Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4652 ATGGCTTCCAAGTTATGTTATCCCCTCTCAATATTTCTCATTCTCTTATTTGCCTCCACAGCATTTTCAGTCACCATTACTAGTCCAAATCCAATTACACCAATCTCACCAGGAACAGCATGCAAATCCACCCCAGACCCAACCTATTGCAAATCCATTCTCCCTCCTCAAAACGCCAACGTTTACGATTATGGTCGATTCTCAGTCAAGAAATCACTCTCACAATCCCGCAAATTCTCAAACCTAATCGACAAATATCTCCAACGTCGCTCCACTCTTTCCACCACCGCTGTGCGAGCACTACAAGATTGTCAATCGCTCAGCGACCTCAACTTTGATTTTCTTTCAAGTTCTTTTCAAACTGTTAACAAAACAACAAAGTTTCTTCCAAGTTTACAAGGCGAAAATATCCAAACATTACTCAGCGCGATTCTGACAAACCAACAAACATGTTTAGATGGTCTTAAAGACACATCTTCAGCTTGGAGTTTTAGAAATGGACTCACAATTCCACTTTCTAATGACACCAAACTCTATAGTGTTTCTCTTGCTTTCTTTACTAAAGGTTGGGTTAATCCCAAAATCAATAAAACTACGTTTCATAACTCCAACCCCTCTAACAAAGGATTTAAAAATGGGCGTTTACCGCTTAAGATGACGAGCAAAACACGCGCGGTTTACGAGTCAGTTAGTCGAAGAAAGCTTCTTCAGAGTGATCAAGTTGGTGAGGATGTTGTGGTGAGAGATATTGTGACAGTTAGTCAAGATGGAAGTGGAAATTTTACTACGATTAATGATGCTATAGCTGCAGCTCCAAATAAATCTGTTTCTACTGATGGATACTTTTTGATCTATGTTACTGCTGGTGTTTATGAAGAGTATGTGATTATTGATAAGAAGAAGACTTATTTGATGATGATTGGAGATGGTATTAACAAGACTATTATCACTGGCAATCATAGTGTTGTTGATGGCTGGACTACATTCGGCTCCCCAACATTCGCTGTGGTTGGGCAAGGATTCGTGGGTGTGAATATGACCATCCGCAACACAGCAGGTGCTATTAAGCACCAAGCAGTGGCACTTAGAAACGGAGCAGATTTATCCACATTTTACAGTTGCAGCTTCGAAGGGTATCAAGACACATTATACACACATTCACTAAGACAATTCTACAGAGAATGTGACATCTACGGAACAGTAGATTTCATATTCGGAAATGCTAAGGTTGTTTTCCAAAATTGTAACCTCTATCCTCGTCTTCCAATGAGTGGACAATTCAATGCCATCACCGCACAAGGAAGAACAGATCCAAACCAAGACACAGGTACCTCAATTCACAATTGTACAATTAAAGGTACAGATGATTTGGTTTCTAGCAATGGTGCTGTTTCAACATATTTAGGAAGACCATGGAAAGAGTATTCAAGAACGGTTTACATGCAAACATTTATGGATAATGTGATCAATGTTGCTGGGTGGCGTGCTTGGGATGGAGAATTTGCATTGAGCACATTGTATTATGCTGAGTTTAACAACAGTGGGCCAGGGTCTAGCACTGATGGTAGAGTGACGTGGCAAGGTTATCATGTGATTAATGCCACGGATGCAGCTAATTTTACGGTGGCAAGTTTTTTGCTTGGTGATGATTGGTTGCCTCAGACAGGGGTGTCTTACACTAATAGCTTAATTAATTAA 1698 0.4022 MASKLCYPLSIFLILLFASTAFSVTITSPNPITPISPGTACKSTPDPTYCKSILPPQNANVYDYGRFSVKKSLSQSRKFSNLIDKYLQRRSTLSTTAVRALQDCQSLSDLNFDFLSSSFQTVNKTTKFLPSLQGENIQTLLSAILTNQQTCLDGLKDTSSAWSFRNGLTIPLSNDTKLYSVSLAFFTKGWVNPKINKTTFHNSNPSNKGFKNGRLPLKMTSKTRAVYESVSRRKLLQSDQVGEDVVVRDIVTVSQDGSGNFTTINDAIAAAPNKSVSTDGYFLIYVTAGVYEEYVIIDKKKTYLMMIGDGINKTIITGNHSVVDGWTTFGSPTFAVVGQGFVGVNMTIRNTAGAIKHQAVALRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAKVVFQNCNLYPRLPMSGQFNAITAQGRTDPNQDTGTSIHNCTIKGTDDLVSSNGAVSTYLGRPWKEYSRTVYMQTFMDNVINVAGWRAWDGEFALSTLYYAEFNNSGPGSSTDGRVTWQGYHVINATDAANFTVASFLLGDDWLPQTGVSYTNSLIN* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4652 565 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Mal3g4652 565 SMART PMEI_2 32 185 IPR006501 GO:0004857
Mal3g4652 565 Pfam Plant invertase/pectin methylesterase inhibitor 39 184 IPR006501 GO:0004857
Mal3g4652 565 CDD PMEI-like_3 39 190 - -
Mal3g4652 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 188 IPR035513 -
Mal3g4652 565 PANTHER PECTINESTERASE 16 562 - -
Mal3g4652 565 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 16 562 - -
Mal3g4652 565 Gene3D - 245 563 IPR012334 -
Mal3g4652 565 Pfam Pectinesterase 251 549 IPR000070 GO:0030599|GO:0042545
Mal3g4652 565 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 174 IPR006501 GO:0004857
Mal3g4652 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 188 IPR035513 -
Mal3g4652 565 SUPERFAMILY Pectin lyase-like 248 560 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4652 Mal-Chr3 126358438 126360713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4652 9 564 Carbohydrate Esterase AT4G02330 63.573 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4652 K01051 - gmx:100800971 934.865