Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4650 ATGGCTACTGGTACTGACCCAAACCTAGAAGAAAAGTACGCCCTTAACAGCAAGGTCATGGTAGGCTCGTCCATCCTTCTCTTCATACTCATACTCATCATCGTTCTCTTTCGCACTTACGTCTACCTCTGCCACCTTCGCAACCGCCGTCTATTCTCTCAAGACTCTGTTAACACCACCACTTTCAAAGAAGAACGCCTTGATCCTTCCGTTCTCAAATCTCTTCCCACCTTCACTTACTCCTCATCCACCGGCCGTGATGTCCTCGACTGCGCCGTCTGTTTGTCGGAGTTCACCGACGGAGATGAATGTCGCAAGCTTCCAAACTGTAACCATGATTTTCATTCCCTCTGTATTGAGCCGTGGTTTGCTTCTCATTCTAATTGCCCTCTCTGCCGAGCTCCGGTCCAACCAGCGACGGTTCACTCTCAAACTGAACCGTGCTCTGTTTCGGGTTCAGGAGAACCTGGTGAGGGTTGTTCTTATTTTCCTGAACCGATTGGGTGTCCGAGAAAGCCGTTTGGTGTAATTGTAGAGTTACAACCGGAGGTGTTGCGGGTCGGATCATGCACCCGAAGATAA 582 0.4983 MATGTDPNLEEKYALNSKVMVGSSILLFILILIIVLFRTYVYLCHLRNRRLFSQDSVNTTTFKEERLDPSVLKSLPTFTYSSSTGRDVLDCAVCLSEFTDGDECRKLPNCNHDFHSLCIEPWFASHSNCPLCRAPVQPATVHSQTEPCSVSGSGEPGEGCSYFPEPIGCPRKPFGVIVELQPEVLRVGSCTRR* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4650 193 PANTHER RING-H2 FINGER PROTEIN ATL64 11 150 - -
Mal3g4650 193 SUPERFAMILY RING/U-box 71 139 - -
Mal3g4650 193 CDD RING-H2_PA-TM-RING 90 133 - -
Mal3g4650 193 SMART ring_2 91 132 IPR001841 -
Mal3g4650 193 ProSiteProfiles Zinc finger RING-type profile. 91 133 IPR001841 -
Mal3g4650 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 139 IPR013083 -
Mal3g4650 193 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 11 150 - -
Mal3g4650 193 Pfam Ring finger domain 90 133 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4650 Mal-Chr3 126352577 126353158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4650 11 189 Rapid Response to Elicitors AT3G16720 34.513 3.18e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4650 - - cam:101488632 227.254