Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4627 ATGGACGCTTCGACTTCCGTAGTAAGTGGCTCACAACCCGTATCGTTGTTGAACAATCCCGAAACAGCCGCGACTGAGGGTATGGGAAATGTTTGCTTGTCCGATGAAAACATGAGTGATGCTTCTAAGGACGAGTTAGAATACAATGATAATGTTGAATTTTCTGGATTAGAGTTCACTGATGAAACAACTGTGAATGGTTTGGAGGACATCTGGAAAATCAACTTCACAAATTTAAGAGTGGAAAATGTAATTAAGTACCACTTTTCAGACGTTGGGGTGGCATACTTATTTTATAATTGGTATGTTGGTTTGCATGGTTTTGCTGCAAGGAAGAGCAAGATAATGAGGAACAAAAATGGGGAAAAAACACAACAAATGTTCTTGTGTTATAGACAGGGACACCGAGAAGAAAAAGTTGGAAGCACAAGTCGAAAAAGAGAACCAAAGCCACTCACAAGATGCGGCTGTGATGCAAAATGTAGGGTTCACATTGATGTTAATAGTGGCCGGTGGTACATTAAGTATCTAAATGATGTCCACAACCATACTTTGTTGGATAGTAAGTTCATGGGCATGCTACCGGCACATAGAAAAATGAATGACTACGACAAATTTCAAATGAACAGCATGAGGAAGGTTGGAATTAGGACTTCAAATATTTATGGTTGGTTTGCTTCTCAGGCTGGAGGATTTGAGAAATTTGGATTGAAAGAGAATACATGGGTTGCAGAAATGTTCGAGAAGCGAAGTATGTGGGCCACAGCCCACATACGAGGTAACTTCTTTGCTGGTTTCAGAACGACGTCTCGATGTGAGGGGCTGCACTCGTTTTTGGGAAAATATGTTAACTATGAAAACAACCTGTTGGAGTTCTTACAACATTTTTTCCGTGCTCTTAGTTATATGAGGTTCAGAGAAGTGCAAGCCGACTTTCAGTCATCACATGGACAAGTTGTGTTGCAAACACAATTGCAAGCTCTTGAGAAGTCTGGGGCAGCTGTATACACCAAGGAGCGGTTTGAATCATTAGGTATTCCTTGTGAACATGTGGTGTGTGTTTTGATAAATATGGACATTGTGCGAATTCCAGAATGTTTGGTGCTGAAAAGGTGGACAAAGACAGCTAAGGACTCACTTGTTTTCAATGGCAACATGTCTGCAACACAAGATCCATCATTGATTAGTCAATATGTGGGTATGGTGGAGAAGTGCAAGAAGATGGCATTGGCGGCAGTGTCTTGTGGCATACCACAGTATGTGCGTAGTACAATGGATTGGGTGACTTCACGTACACAAATGTTGGAAGCACTAGCTAAAGGTGTTGGAGGACCACAACAAGATTCAATACCGCAACATGATGATATTCTTGAAGGCTCACTAAGGAACCCAGCCAGGGTGAGGACAAAGGGATGTGGTGCCTCGTCCTCGTCAGTGCAAAGCAACGGTAAACAAACTACAAGAAGGGTACAAACATGTGGAATATGCAGGTTAGAGGGTCAAAACCGAAAATCGTGTCGCTTTACGAGTCATGTAGAGTATATGGCTCAAACTCAAGTTGGTTCAAATATTATATTTGAGGGAGAAGAAGACGAAGAGGAAGTTGATGATTTTGGTGATGTCCATCCACATACGGTAAATAGCTGA 1647 0.4177 MDASTSVVSGSQPVSLLNNPETAATEGMGNVCLSDENMSDASKDELEYNDNVEFSGLEFTDETTVNGLEDIWKINFTNLRVENVIKYHFSDVGVAYLFYNWYVGLHGFAARKSKIMRNKNGEKTQQMFLCYRQGHREEKVGSTSRKREPKPLTRCGCDAKCRVHIDVNSGRWYIKYLNDVHNHTLLDSKFMGMLPAHRKMNDYDKFQMNSMRKVGIRTSNIYGWFASQAGGFEKFGLKENTWVAEMFEKRSMWATAHIRGNFFAGFRTTSRCEGLHSFLGKYVNYENNLLEFLQHFFRALSYMRFREVQADFQSSHGQVVLQTQLQALEKSGAAVYTKERFESLGIPCEHVVCVLINMDIVRIPECLVLKRWTKTAKDSLVFNGNMSATQDPSLISQYVGMVEKCKKMALAAVSCGIPQYVRSTMDWVTSRTQMLEALAKGVGGPQQDSIPQHDDILEGSLRNPARVRTKGCGASSSSVQSNGKQTTRRVQTCGICRLEGQNRKSCRFTSHVEYMAQTQVGSNIIFEGEEDEEEVDDFGDVHPHTVNS* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4627 548 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 232 337 IPR031052 GO:0006355
Mal3g4627 548 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 85 216 IPR031052 GO:0006355
Mal3g4627 548 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 334 413 IPR031052 GO:0006355
Mal3g4627 548 MobiDBLite consensus disorder prediction 1 22 - -
Mal3g4627 548 Pfam FAR1 DNA-binding domain 98 186 IPR004330 -
Mal3g4627 548 PANTHER OS03G0181600 PROTEIN 232 337 - -
Mal3g4627 548 PANTHER OS03G0181600 PROTEIN 85 216 - -
Mal3g4627 548 PANTHER OS03G0181600 PROTEIN 334 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4627 Mal-Chr3 126082052 126084572 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g4627 FAR1 1.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4627 - - mtr:MTR_6g022080 205.297