LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal3g4552	ATGGCTTCTGAAACCGTCGCTGTCCCAGTCGAAGTTGATCCCAATCTTATCGAAGTCAAGCTCTTCAACCGATGGACCTTCGACGATGTTCAGATCAGTGACGTGTCTCTTGAGGATTACATTGGAGCCAGAGGATCCAAACATGCCACATATGTTCCTCACACTGCTGGAAGGTACTCAAAGAAGCGTTTCAGGAAAGCTCAGTGTCCCATTGTTGAGAGGCTCACCAACTCTCTCATGATGCACGGTAGAAACAATGGAAAGAAACTCATGGCTGTTAGGATTATTAAGCATGCTATGGAAATCATTCATTTGCTAACTGACCAGAACCCAATTCAAGTTATCGTTGATGCTGTTGTCAACAGAGAAGATGCAACCAGAATCGGCTCTGCTGGAGTTGTTAGGAGGCAGGCTGTGGATATCTCACCTCTTCGCCGTGTTAATCAGGCTATCTATCTTCTTACAACAGGTGCCCGTGAAGCTGCATTTAGAAACATCAAGACAATTGCTGAATGCTTAGCTGATGAACTTATTAATGCTGCCAAGGGTTCATCCAACAGCTATGCGATCAAGAAAAAGGATGAGATAGAGAGAGTTGCCAAGGCCAATCGTTAA	615	0.4488	MASETVAVPVEVDPNLIEVKLFNRWTFDDVQISDVSLEDYIGARGSKHATYVPHTAGRYSKKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR*	205

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal3g4552	204	Pfam	Ribosomal protein S7p/S5e	65	204	IPR023798	-
	Mal3g4552	204	PANTHER	40S RIBOSOMAL PROTEIN S5	6	204	-	-
	Mal3g4552	204	PIRSF	RPS7p_RPS7a_RPS5e_RPS7o	1	204	IPR000235	GO:0006412
	Mal3g4552	204	TIGRFAM	uS7_euk_arch: ribosomal protein uS7	18	204	IPR005716	GO:0003735\|GO:0006412\|GO:0015935
	Mal3g4552	204	SUPERFAMILY	Ribosomal protein S7	20	204	IPR036823	-
	Mal3g4552	204	PANTHER	RIBOSOMAL PROTEIN S7	6	204	IPR000235	GO:0006412
	Mal3g4552	204	Gene3D	Ribosomal protein S7 domain	2	204	IPR036823	-
	Mal3g4552	204	CDD	uS7_Eukaryote	20	204	IPR005716	GO:0003735\|GO:0006412\|GO:0015935
	Mal3g4552	204	ProSitePatterns	Ribosomal protein S7 signature.	73	99	IPR020606	GO:0003723\|GO:0003735\|GO:0006412

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal3g4552	Mal-Chr3	125350479	125353987	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal3g4552	18	204	Cytoplasmic Ribosomal Protein Gene Family	AT2G37270	89.474	6.65e-127	354

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal3g4552	K02989		-	gmx:100305898	352.829

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