Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4538 ATGTGTCAAAATTGCTTCACTGTTTCAACCACAACAACCTCATCAACCACCACCGAAATCGGTGTCAACATCAGAATCTCATCTCAATCTTCCAGATTCGTTCGTTCTCCGAAGAGATCTCATCCAGAATCATCATCACCATCATCGGAGATTACATATCGTGGTTTAGTTGATCAAACGATGGTGTCTGAGGCGAAGCGTGTGGTGAGTCGATGCTCCGGTTGCCGAAAAAGGGTTGGGTTGACCGGATTCCCATGTAGATGTGGGGAGTCGTTTTGCGCCAATCATCGGTACTCCGATCGGCATGATTGTGGGTATGATTATAAAGCGGCTGAGAGAGAAGCGATTGTGATGGGAGAATCTTGTCATCAGAGCTGCGGAAATTGTTACGGTGTGAAAATTTGA 405 0.4617 MCQNCFTVSTTTTSSTTTEIGVNIRISSQSSRFVRSPKRSHPESSSPSSEITYRGLVDQTMVSEAKRVVSRCSGCRKRVGLTGFPCRCGESFCANHRYSDRHDCGYDYKAAEREAIVMGESCHQSCGNCYGVKI* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4538 134 Gene3D - 35 123 IPR035896 -
Mal3g4538 134 Pfam AN1-like Zinc finger 72 109 IPR000058 GO:0008270
Mal3g4538 134 ProSiteProfiles Zinc finger AN1-type profile. 66 112 IPR000058 GO:0008270
Mal3g4538 134 MobiDBLite consensus disorder prediction 31 52 - -
Mal3g4538 134 PANTHER AN1-LIKE ZINC FINGER PROTEIN 2 117 - -
Mal3g4538 134 SUPERFAMILY AN1-like Zinc finger 59 116 IPR035896 -
Mal3g4538 134 SMART AN1_Zf_4 72 109 IPR000058 GO:0008270
Mal3g4538 134 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4538 Mal-Chr3 125244169 125244573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4538 70 117 C2H2 Transcription Factor Family AT3G52800 62.500 1.84e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4538 - - var:108333085 124.405