Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4524 ATGGCTGCCACCAATTCCGGAACAGCTCCCCGTCAACTCTCTCAGAAAGAAGCCGATATCCAAATGATGCTTGCCGCCGATGTCCATCTCGGTACAAAAAACGTCGACTTTCAGATGGGAAGATACATCTTCAAGCGCCGCAACGATGCAGCAATGAAGAGGTGTAAAAAGCTTGAGAATGAGTTGCCTGATTGTCTCCTATCTTATATCTTTTCCAAGTTAGCTTTGAAGGATTTGGTGAAAACCAGTGTGTTGTCCAAACAATGGATTCACGAATGGGGATTAAGGATGGACCTCAACTTCGATCTCCATACCATGTTTGACTATAACACAATTCAAGACTTACCAAAAAGTCTTCCATTCTTTCAAAGGTTTCACTTTCAATCTGAATTTGCCACAAGATTGGATCAATTTATGCTCCATTATAAAGGTGCCATGATCCGTTCAATCCGAGTAAAATTTCCATTAGGCAATCAACATAAGGATGCAATTGATAGATTGATCTCCAAAGGAATTGCTAAGGGTGCCAAACGTATTGAACTTCTCTTATCATCTGAAACAAATGATACTACTGATTCTATTTTGCCATACAAATTTTCCTTTATTCTCTTGTCCGACAATGATTCTCTGACGTATCTGCACCTACAAAATTGCCTCCTAGTAGAACCTATGGACTTCTCTGGATTAAAAAATTTGAGAACTCTTGTGTTGCATCTAGTTGATGTGAAGCAGAAATTGCTTCGGAGTCTGTGTTCCAATTGCAGCCATCTTGTAGACTTCACCCTTGATGATTGTCAGTTCACTTCTAGCTTGATAATAAACAGTCCAACGTTGATTCGTTTGAACATTGTTAACTGTGCGGGTTACTTTAAAAAGTTTATAACTATCATTGCATCAAATCTCTCATACTTTGAATATTCTTGTAATGAACGTCTTCAAGGACGCCCAATGAACATTCAGGCTCATATGTTATCCAAGTTTAGCTTTAGAGGTAAAAATTTTTCTAAACGTGTTGGATTTTCTGGATTGAAAAACATAACAACAATTAAGTTGGATGGACTAGTGGAAGATCTATCTAAGCACATCTTGCCTCATTTGTTTTCTGAATGTCTCCAACTTGAAGATGTCACCTTTAAGAACTGCTTAGTCATCAGTTCAATAAAAATTACCAGTCCAAAGTTACGTCATTTGAACATATTTGATTGTGGCTGGGCGAATGACTCTCCTTTTGAGATATCCATTGATGCATTGAATCTCTCAACCTTTGAATATAGTGCTCACCCCATGTGTATAATTTCTGTTACGGCTCCAAAGTTATTGAAGGTTTTCTGGATTCCAGCTGAGATAATCCAAACACCATACCTCTTTGATCCAATTGCAAGATTACCACATATTGAGCATTTAGCTATGATCATCACCCGTTTACAGATAAAGGAATTAACGAAGGTCTTGGTTCGATTTCAAAATCTAAGACAATTGGAGTTATTAATTGAGGGACCATATTATTCACATGAGGACTACTTTTGGATTTTAGATATTGCAATGGCTTCTCAGCATCTCCAAAAACTTTATCTGACAATTAAAAATGTAAGTCCGATTGTACATCCGAATAAACATTCACGTATGGCTGGATTTAAGAGGCAAAAAAGAGGGTTTTCTCATAATCATTTGAAATATGTGGAGTTTCGTGGTTGTGTGTGCTCCATAAATGTTATTGATTTAGCTAGTCACCTATTGAGAGGTGCAAATTCGCTTAAGAAAATGATTTTTAGTTCTCTTGACAAATTCTGTAGATGGACTAATGACCCTCGTGCCCCTCGTAAAAGTAGATGGATTGATGTTTGTGGTGGTGGTTGTTGGTTTGAAGAGGATTTTATTCGCGAGATGCTTAAAGATGAAGTAAATGAACAATGCCAGCTTATAATTCTGTAG 1932 0.3747 MAATNSGTAPRQLSQKEADIQMMLAADVHLGTKNVDFQMGRYIFKRRNDAAMKRCKKLENELPDCLLSYIFSKLALKDLVKTSVLSKQWIHEWGLRMDLNFDLHTMFDYNTIQDLPKSLPFFQRFHFQSEFATRLDQFMLHYKGAMIRSIRVKFPLGNQHKDAIDRLISKGIAKGAKRIELLLSSETNDTTDSILPYKFSFILLSDNDSLTYLHLQNCLLVEPMDFSGLKNLRTLVLHLVDVKQKLLRSLCSNCSHLVDFTLDDCQFTSSLIINSPTLIRLNIVNCAGYFKKFITIIASNLSYFEYSCNERLQGRPMNIQAHMLSKFSFRGKNFSKRVGFSGLKNITTIKLDGLVEDLSKHILPHLFSECLQLEDVTFKNCLVISSIKITSPKLRHLNIFDCGWANDSPFEISIDALNLSTFEYSAHPMCIISVTAPKLLKVFWIPAEIIQTPYLFDPIARLPHIEHLAMIITRLQIKELTKVLVRFQNLRQLELLIEGPYYSHEDYFWILDIAMASQHLQKLYLTIKNVSPIVHPNKHSRMAGFKRQKRGFSHNHLKYVEFRGCVCSINVIDLASHLLRGANSLKKMIFSSLDKFCRWTNDPRAPRKSRWIDVCGGGCWFEEDFIREMLKDEVNEQCQLIIL* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4524 643 PANTHER F-BOX PROTEIN-LIKE 54 583 - -
Mal3g4524 643 Gene3D Ribonuclease Inhibitor 192 336 IPR032675 -
Mal3g4524 643 PANTHER EXPRESSED PROTEIN 54 583 - -
Mal3g4524 643 SUPERFAMILY RNI-like 193 528 - -
Mal3g4524 643 SUPERFAMILY F-box domain 60 98 IPR036047 GO:0005515
Mal3g4524 643 Gene3D Ribonuclease Inhibitor 337 605 IPR032675 -
Mal3g4524 643 SUPERFAMILY Ribosomal protein S2 15 49 IPR023591 -
Mal3g4524 643 Gene3D - 19 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4524 Mal-Chr3 125101394 125107231 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4524 1 50 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 70.000 2.22e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4524 - - mtr:MTR_6g013240 660.988