Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal3g4510 | ATGTTTAAAGGCTTTGGACATGTTGAGTTTGCAACTGTTGAGGCTGCCCAATACGCACTTGGGATGAATGGGAAAAAATTATTAAATTGTGCTGTCCAACTTGATTTTGATCGGCAGAGGGAAGCTTTTACTCCTAATAATAACTGCAACTACTCAGCCCCAAGCGGTGGAAGAGGCCTGTCTCAAACAATATATGTCAGGGGTTTTGATAAGAATCTTGGGGAGGATGAGATTAGAGCAAAATTGGAGGAGCATTTTGGTACTTGTGGGGAAGTTACACGGGTGTCAATCCCAAAAGATTTTGAATCTGGTTATTCCAAGGGGTTTGCATTTGTGGACTTCAACGATTCCAGCAGCTTGAACAAAGCTTTTGAACTCAATGGATCTGAGCTTGATGGCTATTCTTTGACTGTGGATGAAGCCAAATCGACTAGAGGAGCCGGAGGCCGAGGCTGGGGTAGCCCCGGTGGAAAGCCTGGAGGAGGCAGAGGTGGTGGTTGTGGTGGAGGTATTATTAATGATAGATTTTTCATATGA | 537 | 0.4451 | MFKGFGHVEFATVEAAQYALGMNGKKLLNCAVQLDFDRQREAFTPNNNCNYSAPSGGRGLSQTIYVRGFDKNLGEDEIRAKLEEHFGTCGEVTRVSIPKDFESGYSKGFAFVDFNDSSSLNKAFELNGSELDGYSLTVDEAKSTRGAGGRGWGSPGGKPGGGRGGGCGGGIINDRFFI* | 179 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal3g4510 | 178 | Gene3D | - | 1 | 44 | IPR012677 | - | |
Mal3g4510 | 178 | MobiDBLite | consensus disorder prediction | 143 | 167 | - | - | |
Mal3g4510 | 178 | SUPERFAMILY | RNA-binding domain, RBD | 2 | 79 | IPR035979 | GO:0003676 | |
Mal3g4510 | 178 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 71 | 136 | IPR000504 | GO:0003723 | |
Mal3g4510 | 178 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 2 | 32 | IPR000504 | GO:0003723 | |
Mal3g4510 | 178 | SUPERFAMILY | RNA-binding domain, RBD | 63 | 170 | IPR035979 | GO:0003676 | |
Mal3g4510 | 178 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 62 | 143 | IPR000504 | GO:0003723 | |
Mal3g4510 | 178 | PANTHER | BNAA08G02930D PROTEIN | 2 | 143 | - | - | |
Mal3g4510 | 178 | SMART | rrm1_1 | 63 | 139 | IPR000504 | GO:0003723 | |
Mal3g4510 | 178 | Gene3D | - | 58 | 172 | IPR012677 | - | |
Mal3g4510 | 178 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H | 2 | 143 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal3g4510 | Mal-Chr3 | 124939303 | 124940409 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal3g4510 | 3 | 132 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 33.835 | 8.28e-09 | 52.4 |