Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4510 ATGTTTAAAGGCTTTGGACATGTTGAGTTTGCAACTGTTGAGGCTGCCCAATACGCACTTGGGATGAATGGGAAAAAATTATTAAATTGTGCTGTCCAACTTGATTTTGATCGGCAGAGGGAAGCTTTTACTCCTAATAATAACTGCAACTACTCAGCCCCAAGCGGTGGAAGAGGCCTGTCTCAAACAATATATGTCAGGGGTTTTGATAAGAATCTTGGGGAGGATGAGATTAGAGCAAAATTGGAGGAGCATTTTGGTACTTGTGGGGAAGTTACACGGGTGTCAATCCCAAAAGATTTTGAATCTGGTTATTCCAAGGGGTTTGCATTTGTGGACTTCAACGATTCCAGCAGCTTGAACAAAGCTTTTGAACTCAATGGATCTGAGCTTGATGGCTATTCTTTGACTGTGGATGAAGCCAAATCGACTAGAGGAGCCGGAGGCCGAGGCTGGGGTAGCCCCGGTGGAAAGCCTGGAGGAGGCAGAGGTGGTGGTTGTGGTGGAGGTATTATTAATGATAGATTTTTCATATGA 537 0.4451 MFKGFGHVEFATVEAAQYALGMNGKKLLNCAVQLDFDRQREAFTPNNNCNYSAPSGGRGLSQTIYVRGFDKNLGEDEIRAKLEEHFGTCGEVTRVSIPKDFESGYSKGFAFVDFNDSSSLNKAFELNGSELDGYSLTVDEAKSTRGAGGRGWGSPGGKPGGGRGGGCGGGIINDRFFI* 179
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4510 178 Gene3D - 1 44 IPR012677 -
Mal3g4510 178 MobiDBLite consensus disorder prediction 143 167 - -
Mal3g4510 178 SUPERFAMILY RNA-binding domain, RBD 2 79 IPR035979 GO:0003676
Mal3g4510 178 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 71 136 IPR000504 GO:0003723
Mal3g4510 178 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2 32 IPR000504 GO:0003723
Mal3g4510 178 SUPERFAMILY RNA-binding domain, RBD 63 170 IPR035979 GO:0003676
Mal3g4510 178 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 62 143 IPR000504 GO:0003723
Mal3g4510 178 PANTHER BNAA08G02930D PROTEIN 2 143 - -
Mal3g4510 178 SMART rrm1_1 63 139 IPR000504 GO:0003723
Mal3g4510 178 Gene3D - 58 172 IPR012677 -
Mal3g4510 178 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 2 143 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal3g4510 Mal-Chr3 124939303 124940409 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4510 3 132 Eukaryotic Initiation Factors Gene Family AT4G34110 33.835 8.28e-09 52.4