Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4508 ATGGCTGCCCCAAATCCCGGAACAGGTCCCCGTCAACTCTGTCAGAAAGAAGCCGATATCCATCTCGGTACAAAAAACGGCGACTTTCAGATGGAAAGATGCATCTTCAAGCGCCGCAACAATGCAGCAATGAAGAGGTGTAAATTAAAGCTTGAGAATGAGTTGCCTGATTGTGTCATATCTTATATCTTTTCCAAGTTAGCTTTGAAGGATTTGGTGAAAACCAGTGTGTTGTCCAAACATTGGATTCACGAATGGGGATTAAGGATGGACCTCAACTTCGATCTCCATACCATGTTTGACTATAACACAATTCAAGACTTACCAAAAAGTCTTCCATTCTTTCAAAGGTTTCACTTTCAATCTCAATTTGCCACAAGATTGGATCAATTTATGCTCCATTATAAAGGTGCCATGATCCGTTCAATCCGAGTAAAATTTCCATTAGGCAATGAACATAGGGATTTTCTGGATTGA 477 0.4046 MAAPNPGTGPRQLCQKEADIHLGTKNGDFQMERCIFKRRNNAAMKRCKLKLENELPDCVISYIFSKLALKDLVKTSVLSKHWIHEWGLRMDLNFDLHTMFDYNTIQDLPKSLPFFQRFHFQSQFATRLDQFMLHYKGAMIRSIRVKFPLGNEHRDFLD* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4508 158 Gene3D - 36 85 - -
Mal3g4508 158 Pfam F-box domain 54 82 IPR001810 GO:0005515
Mal3g4508 158 PANTHER F-BOX PROTEIN-LIKE 50 140 - -
Mal3g4508 158 PANTHER EXPRESSED PROTEIN 50 140 - -
Mal3g4508 158 SUPERFAMILY F-box domain 53 92 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4508 Mal-Chr3 124914318 124915718 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4508 1 42 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 50.000 7.36e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4508 - K02998 mtr:MTR_7g105510 215.698