Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4503 ATGAGACCTACAAACTTTCTTAGGGTTTTGAACAAACAATTTCTCGGAATCGCCGGCGACACTGCAAATGCTCTTGCTAACAAGCTAAAATATCCCTCTCCTCCTGTTGCGACGCGTAAACCGGCGTTTATAGATGCATTTCTATACAAAATGAAGAAGAATCCAGAACTTTTGAAGAACAAAAACATTTGGTCAAGGAGATCCACTATATTGCCGGAATTTGTTGATTCTCATGTCAAGATTTACAATGGAAAAACCTTCATTCGTTGTAAAATCACCGAGGGAAAAGTGGGACATAAGTTTGGTGAGTTTGCTCTCACTAGGAAACGTAAATCAAGGGATCAACCTAATGCTAAAGCTAAGCAACTCAAGAAAAAGAAGTGA 384 0.3906 MRPTNFLRVLNKQFLGIAGDTANALANKLKYPSPPVATRKPAFIDAFLYKMKKNPELLKNKNIWSRRSTILPEFVDSHVKIYNGKTFIRCKITEGKVGHKFGEFALTRKRKSRDQPNAKAKQLKKKK* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4503 127 Hamap 30S ribosomal protein S19 [rpsS]. 6 119 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mal3g4503 127 PRINTS Ribosomal protein S19 family signature 63 82 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mal3g4503 127 PRINTS Ribosomal protein S19 family signature 83 95 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mal3g4503 127 PRINTS Ribosomal protein S19 family signature 95 110 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mal3g4503 127 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 33 122 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mal3g4503 127 Pfam Ribosomal protein S19 48 111 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mal3g4503 127 ProSitePatterns Ribosomal protein S19 signature. 83 107 IPR020934 GO:0003723
Mal3g4503 127 MobiDBLite consensus disorder prediction 108 127 - -
Mal3g4503 127 Gene3D 30s Ribosomal Protein S19; Chain A 36 122 IPR023575 GO:0003735|GO:0005840|GO:0006412
Mal3g4503 127 PANTHER 40S RIBOSOMAL PROTEIN S19, MITOCHONDRIAL 33 122 - -
Mal3g4503 127 SUPERFAMILY Ribosomal protein S19 39 112 IPR023575 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4503 Mal-Chr3 124867474 124867857 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4503 38 120 Cytoplasmic Ribosomal Protein Gene Family AT1G04270 31.765 7.61e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4503 K02965 - gmx:100782150 186.422