Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4502 ATGGAGGCTCCAAAGATGGAAACCAAGGTTGAAAATCATATGACATCAGCTGCGGCTTTTGTCGAAGGCGGCATTCAAGATTCTTGTGACGATGCTTGCAGCATATGCCTTGAAGAGTTTTGTGATATTGATCCAGCAACTGTCACTGCTTGTCGACACGAGTTTCACCTACAGTGCGTTTTGGAATGGTGTCAAAGAAGCTCCCAATGTCCTATGTGTTGGCAACCTATTAGCTTGAATGATCCTACCGGTCAAGAATTGTTTAAGGCAGTAGAGCAAGAGAGAAAGTGGAGGGTTACTCCATCAAGAAATGTTGGCATCTTTCATCGTCCTACTCTTGGAGGTTTTGGATTGCCACATCTACACATGGGCGTTAATGATTCTAGTTTAGAAGAGCGAATACTTCAAAATTTAGCTATTGCTGCATCAATGGGAAGAACAAACAACATTGGTCGAAGGGAAAGGCAACATATTCGACCATCTACTCACGGTCAACCACACTTCTTATTACTCTCAAATCAACATGTTGTACCTTCATCAAATTTTAGTTCAGCAGATGAAAGAGGAGACAATCTAAATGCAATTCATAGGAGTAGTCAATCTTCTCCAATAACATCTGATGAGGATGAACCATTACAACAGACACCAAAACTTCAAATTGGAAGTTCCTCAACTCATGGATCAACTGTTACAGAAACAAATGGCTTAGAAGTTTACTCTAATGATAGAAGCTATGTTGCCAATTCTTGCCCAATAAACAAAGATAGAGCCCAACCATCTGAAATCCACCCATTTTCAGATACTTTGCGGTCCAAACTCAATGCATTGTCGACGAGATATAAAGAGTCAATTTCAAAGGGTACAAAGGGTTGGAAGGAGAGGTTGTTCTCTCAAAGTTCTTCCATGTCAGAACTTGGTTCAAATTCGAGAAAAAGGTGA 939 0.4058 MEAPKMETKVENHMTSAAAFVEGGIQDSCDDACSICLEEFCDIDPATVTACRHEFHLQCVLEWCQRSSQCPMCWQPISLNDPTGQELFKAVEQERKWRVTPSRNVGIFHRPTLGGFGLPHLHMGVNDSSLEERILQNLAIAASMGRTNNIGRRERQHIRPSTHGQPHFLLLSNQHVVPSSNFSSADERGDNLNAIHRSSQSSPITSDEDEPLQQTPKLQIGSSSTHGSTVTETNGLEVYSNDRSYVANSCPINKDRAQPSEIHPFSDTLRSKLNALSTRYKESISKGTKGWKERLFSQSSSMSELGSNSRKR* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4502 312 MobiDBLite consensus disorder prediction 292 306 - -
Mal3g4502 312 SUPERFAMILY RING/U-box 26 80 - -
Mal3g4502 312 MobiDBLite consensus disorder prediction 196 236 - -
Mal3g4502 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 81 IPR013083 -
Mal3g4502 312 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 7 311 - -
Mal3g4502 312 Pfam Ring finger domain 32 73 IPR001841 -
Mal3g4502 312 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 7 311 - -
Mal3g4502 312 ProSiteProfiles Zinc finger RING-type profile. 33 73 IPR001841 -
Mal3g4502 312 SMART ring_2 33 73 IPR001841 -
Mal3g4502 312 MobiDBLite consensus disorder prediction 283 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4502 Mal-Chr3 124861490 124864250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4502 30 81 C3H Transcription Factor Family AT3G02290 44.231 2.83e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4502 K19043 - gmx:100819110 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4502 3 124861490 124864250 Mal3g4502 3 124861490 124864250 ECH