Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4499 ATGAAGCCACTTCAATCTAATGCGGCTTCGGAGAAACAAACAAGTATATCACAAGAAGTTGCAGAACCAGTTATGCAGTTGAAGGAAAAACCAAAGCCTGCAAAACCAATGATGTTGAAAAATATTAAGAGGGTAACAACAAAAAGTGCAGGTCTTCAAGCAGAATCAGTTTTGCTGACAAACAATGGTCCTTTTCGGGAATTTTATAAGTTAGGAGATGAACTTGGGAAAGGACAGTATGGAACTACTTCACTTTGTTTGGAGAAATCAACCGGGAAAATGTATGCATGCAAGGCAATTCCAAAGGTAAAATTGTTGAAAGAGAATGATATAGAGGATGTGAGGACGGAGATTAAGATTATGCATCACTTGGTTGGGATTCCGAGTGTGATATCAATAAAAGGAGCTTATGAAGATCCCGTAGTTGTTTATATTGTTATGGATTTATGTGAAGGAGGTGAGTTATTTGATAGAATTGTGGAAAGGGGTTATTACACCGAGAGAAAGGCTGCTAAACTCGCAAGAACAATTGTTAGTGTTGTTGAGGCTTGTCACTCACGTGGAGTTATGCATCGTGATCTTAAGCCTGAAAATTTTCTTTTTGTTGATGGAGGTGAAGATTCCACTCTTAAGGCAATTGATTTTGGATTGTCCATTTTCTTCAAACCAGGAGAAAAGTTTAGTGATATTGTAGGAAGTGCTTATTATATTGCACCTGAGGTTCTAGAAGAGTGTTATGGTCCAGAAGCTGATGTGTGGAGTGCAGGTGTGATCATATACATTCTCTTATGTGGAACACCTCCTTTTTATGGTGAATTGGATCAAGAGATATTTGATGAGGTTATGCATGGTGAAGTTGATTTCACTTCGGATCCTTGGCCAAATATCTCTGAAAGTGCAAAAGATTTGATTAAGAAGATGCTTGTTAGAGATCCTAGTCAACGAATTACAGTGCATGAGGTTCTAAGTCACCCTTGGATTCAGGTTGATGGAGTTGCTCCAAACAAGCCTCTTGATTCCGCAACTTTGAGTCGTCTAAAGCAATTTTCTGCCATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCAGAGAATCTTCCAGAAGAAGAAATTTCTGGGTTGAAAGAATCGTTTAAGATGATAGATACAGACAATACCGGTCAAATTACTTTTGAAAAACTCAAGGTTGGACTGAAAAAATTTGGTGCCAATCTCTCTGAATCCGAAATTTTTGATCTAATGCAAGCGGCCGATATTGATAAAAATGGCACGATTGACTATGGAGAATTCATAGCTGCAACATTGCATTTAAACAAAGTTGACAAGGAAGATCATTTAGTTGCAGCATTCTCATATTTTGATAAAGATGGAAGTGGCTACATCACTCAAGATGAGCTTCAACAAGTTTGTAAGGAGTTTGGCATGAAGGATGTCCACTTTGAGGAAATGATCCGAGAGGCTGATCAAAATAATGATGGACAAATAGACTACAATGAATTTGTGACTATGATGCAGAGAGGCAATGCAGATTTAGAAAATAAAGGTGCAAAGTGTAGCACTAGCTTTAACATTGGATTAGGGAAGACAGAGACATTATCAATATGTTAG 1611 0.3786 MKPLQSNAASEKQTSISQEVAEPVMQLKEKPKPAKPMMLKNIKRVTTKSAGLQAESVLLTNNGPFREFYKLGDELGKGQYGTTSLCLEKSTGKMYACKAIPKVKLLKENDIEDVRTEIKIMHHLVGIPSVISIKGAYEDPVVVYIVMDLCEGGELFDRIVERGYYTERKAAKLARTIVSVVEACHSRGVMHRDLKPENFLFVDGGEDSTLKAIDFGLSIFFKPGEKFSDIVGSAYYIAPEVLEECYGPEADVWSAGVIIYILLCGTPPFYGELDQEIFDEVMHGEVDFTSDPWPNISESAKDLIKKMLVRDPSQRITVHEVLSHPWIQVDGVAPNKPLDSATLSRLKQFSAMNKLKKMALRVIAENLPEEEISGLKESFKMIDTDNTGQITFEKLKVGLKKFGANLSESEIFDLMQAADIDKNGTIDYGEFIAATLHLNKVDKEDHLVAAFSYFDKDGSGYITQDELQQVCKEFGMKDVHFEEMIREADQNNDGQIDYNEFVTMMQRGNADLENKGAKCSTSFNIGLGKTETLSIC* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4499 536 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 513 - -
Mal3g4499 536 SUPERFAMILY EF-hand 366 509 IPR011992 -
Mal3g4499 536 CDD EFh 446 506 IPR002048 GO:0005509
Mal3g4499 536 Pfam EF-hand domain pair 387 437 IPR002048 GO:0005509
Mal3g4499 536 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 16 513 - -
Mal3g4499 536 ProSitePatterns EF-hand calcium-binding domain. 489 501 IPR018247 -
Mal3g4499 536 SMART efh_1 374 402 IPR002048 GO:0005509
Mal3g4499 536 SMART efh_1 446 474 IPR002048 GO:0005509
Mal3g4499 536 SMART efh_1 410 438 IPR002048 GO:0005509
Mal3g4499 536 SMART efh_1 480 508 IPR002048 GO:0005509
Mal3g4499 536 ProSiteProfiles Protein kinase domain profile. 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4499 536 ProSitePatterns EF-hand calcium-binding domain. 419 431 IPR018247 -
Mal3g4499 536 ProSiteProfiles EF-hand calcium-binding domain profile. 442 477 IPR002048 GO:0005509
Mal3g4499 536 Pfam EF-hand domain pair 446 506 IPR002048 GO:0005509
Mal3g4499 536 CDD STKc_CAMK 68 326 - -
Mal3g4499 536 MobiDBLite consensus disorder prediction 1 23 - -
Mal3g4499 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Mal3g4499 536 SUPERFAMILY Protein kinase-like (PK-like) 67 328 IPR011009 -
Mal3g4499 536 MobiDBLite consensus disorder prediction 1 21 - -
Mal3g4499 536 Gene3D - 335 511 - -
Mal3g4499 536 ProSiteProfiles EF-hand calcium-binding domain profile. 480 511 IPR002048 GO:0005509
Mal3g4499 536 ProSiteProfiles EF-hand calcium-binding domain profile. 406 441 IPR002048 GO:0005509
Mal3g4499 536 ProSitePatterns EF-hand calcium-binding domain. 455 467 IPR018247 -
Mal3g4499 536 Gene3D Phosphorylase Kinase; domain 1 71 154 - -
Mal3g4499 536 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Mal3g4499 536 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Mal3g4499 536 CDD EFh 375 434 IPR002048 GO:0005509
Mal3g4499 536 Gene3D Transferase(Phosphotransferase) domain 1 155 333 - -
Mal3g4499 536 Pfam Protein kinase domain 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4499 536 SMART serkin_6 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4499 Mal-Chr3 124832510 124836386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4499 7 509 EF-hand Containing Proteins AT3G10660 68.254 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal3g4499 Pkinase 3.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4499 K13412 - gmx:100814475 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3448 1 59099740 59103581 Mal3g4499 3 124832510 124836386 PCT