Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4481 ATGGCTATGCAAACTGTTTATCTGAAAGAACATGAAGGAATTGCACACAATTTTGTGGGGCAATTGTCATCTGGTACTAATAATTCAGCTGCTGCTGCACCATGGTGGAGTGGTTTTGGATCTCAATCCCTTTATGGAGAGTCTGGTGGCCAAATCAAATCCTTTTCATTGGAGCCACCTATGTCTGCTGTTGACCAACTTGCTGCAAGTAAGCAATCTGCTAGAGGAACTGAACATGTGTTTGGGAAAGGGCATACCAATCACTTTACCATCTTTCCAGATGATTTTAAAATGTCTAGTGATGCACCAAAGCCTCATACAGCCATATCACTGCAGTCATCACTCCCCGATACCCCGACTCGTTTCGAGCTAGGATTTAGTCAGCCTATGATCTGTACAAAATATCGTTATGCAGATCAATTTTATGGACTCATCTCAACTTATGGACCTCAAATTCCGGGACGTATAATGCTGCCGCTCAGCATGACATCTGATGATGGACCGATTTATGTGAATGCTAAGCAGTACCATGGAATCATTAGACGTCGGCAGTCCCGGGCCAAAGCTGTACTTAGTCAGAAATTGATTAAACGCCGCAAGCCCTACATGCACGAGTCACGCCATCTCCATGCAATGCGGCGACCAAGAGGATGTGGTGGTCGCTTCTTGAACACAAAGAAATCTGCCAATGGAAATGGAAAAACTGGAAGTAAAGTGCATAAATTTGGCGGTCAACAATTGCAGTTCAGTGGCTCTCAGAGTTCCGAAGTCTTTGAATCTGATGTTGGAACTTTAAACTCTTCAAAAGAAACTAATGGTAGCAGTCCAAATATTTCCGGGTCAGAGGTGACTAGTTTGTATTCCAGGGGAAATTTTGACAGCTTTACCGTCAATCATCTTGGATCTACCGTCCACTCTCTGGCAGACATGATCGATGGTGGGCGTGGCGTTATCATGCCTACCAAATGGATTACAGCAGCTGGCAACTGCTGTAACCTTGAAGCTTGA 1008 0.4444 MAMQTVYLKEHEGIAHNFVGQLSSGTNNSAAAAPWWSGFGSQSLYGESGGQIKSFSLEPPMSAVDQLAASKQSARGTEHVFGKGHTNHFTIFPDDFKMSSDAPKPHTAISLQSSLPDTPTRFELGFSQPMICTKYRYADQFYGLISTYGPQIPGRIMLPLSMTSDDGPIYVNAKQYHGIIRRRQSRAKAVLSQKLIKRRKPYMHESRHLHAMRRPRGCGGRFLNTKKSANGNGKTGSKVHKFGGQQLQFSGSQSSEVFESDVGTLNSSKETNGSSPNISGSEVTSLYSRGNFDSFTVNHLGSTVHSLADMIDGGRGVIMPTKWITAAGNCCNLEA* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4481 335 MobiDBLite consensus disorder prediction 214 280 - -
Mal3g4481 335 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 3 333 - -
Mal3g4481 335 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 3 333 IPR001289 GO:0003700|GO:0006355
Mal3g4481 335 MobiDBLite consensus disorder prediction 225 280 - -
Mal3g4481 335 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 168 222 IPR001289 GO:0003700|GO:0006355
Mal3g4481 335 Gene3D - 166 226 - -
Mal3g4481 335 SMART cbf3 164 225 IPR001289 GO:0003700|GO:0006355
Mal3g4481 335 PRINTS CCAAT-binding transcription factor subunit B signature 199 222 IPR001289 GO:0003700|GO:0006355
Mal3g4481 335 PRINTS CCAAT-binding transcription factor subunit B signature 168 190 IPR001289 GO:0003700|GO:0006355
Mal3g4481 335 ProSiteProfiles NF-YA/HAP2 family profile. 165 225 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4481 Mal-Chr3 124643907 124646563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4481 1 334 CCAAT-HAP2 Transcription Factor Family AT3G05690 44.602 1.64e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Mal3g4481 CBFB_NFYA 3.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4481 K08064 - gmx:100527677 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4481 3 124643907 124646563 Mal1g3414 1 57986944 57989469 PCT