Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4473 ATGTTTGAAGGAGAGAATGAATACACGATTAGTACTGTTATAACAGTCGTTAATATATACGATTACAATACATCACAACTCCCACAAATTTCAGGAGAGGCTAGTATGAGAGACTTGGAGCAATGGTTCTTTTTGGTTCCAAGGCAAGAAACCACAAGATCTCTTAATCATGTTTATTCGTCTGATAATCGCATCGTCGGAATGAAAAGGACTATGGTTTTCTATAGTGGACGAGCTCCAAATGGAAAGAAAACTGATTGGAAAATGAACGAGTATAAGGCCATCCAATTAGATGAAGCATCCTCTTCAAACCAAGTAGCTCCTAAGTTAAGGCAAGAATTCAGTTTATGCCGAGTGTACAAGAAATCAAAGTGCTTAAGGATAATTAGTGCAACAAACTCACCAGAGAGCTCTCCCTCAATAGACCATGGCCAACCCCCACAAGAGGATGGAGAAGCTAGCCAGATGGATATTGTTGACTATGATGCTTTGTTGGATTGGGAACAAGTGGATTGGTTTTTAGGGTCGGAGCCATGA 537 0.4022 MFEGENEYTISTVITVVNIYDYNTSQLPQISGEASMRDLEQWFFLVPRQETTRSLNHVYSSDNRIVGMKRTMVFYSGRAPNGKKTDWKMNEYKAIQLDEASSSNQVAPKLRQEFSLCRVYKKSKCLRIISATNSPESSPSIDHGQPPQEDGEASQMDIVDYDALLDWEQVDWFLGSEP* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4473 178 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 52 142 - -
Mal3g4473 178 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 51 - -
Mal3g4473 178 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 9 51 - -
Mal3g4473 178 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 52 142 - -
Mal3g4473 178 ProSiteProfiles NAC domain profile. 1 122 IPR003441 GO:0003677|GO:0006355
Mal3g4473 178 Gene3D NAC domain 3 126 IPR036093 GO:0003677|GO:0006355
Mal3g4473 178 Coils Coil 178 178 - -
Mal3g4473 178 Pfam No apical meristem (NAM) protein 10 93 IPR003441 GO:0003677|GO:0006355
Mal3g4473 178 SUPERFAMILY NAC domain 12 122 IPR036093 GO:0003677|GO:0006355
Mal3g4473 178 MobiDBLite consensus disorder prediction 132 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4473 Mal-Chr3 124566390 124567878 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4473 4 127 NAC Transcription Factor Family AT3G44350 42.958 2.38e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal3g4473 NAM 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4473 - - gmx:100800056 206.838