Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4470 ATGGCAACGTACTATCATGGTAATTCTGAAATCCAATCAAGTGGTGGTGGCGGCGGCGCCGACGGACTCCAAACACTAGTTCTTATGAATCCAAGCTATATACAATATTCTGATACGACACAGCAACAACAAGCTCAACCACCTTCTCATGCCGCGGCCGGTAACTATGTTTTTCTAAACTCAACAGCCGCGGAAAACAACTCCTTCTCACCTCACGCGCCATCTTCCAACACTCAACAATTTGTCGGCATCCCTCTCAACCACCAACACCAAATCCACGCGCACCATGATGTCGTACCTTCCTTGCATGGCTTCCTTCCGCACATGCAGTACAATCAATGGAACACAATTGACCCAAACACGGCGGCGCGTGAAACACCACGCGCTCAACAAGGACTGTCTTTAAGCCTCTCTTCACAACCAGCAAGGTTCGTTTCTATGTCTGGTGGTTCTCCGTCACCGGCTTCTGGGGTTACTACTACTAACAACGGAAATCCGGGGATTCAGTTGCTGAGCTCGAAGTATTTGAGGGCAGCGCATGAGCTTCTAGAAGAGGTTGTGAATGTGAATAGTGGTGTTGAGTTAGGAAAGAAAAGTGGTGGATTGAACAAGGTGAATATTGGAGAATCATCGGGAGTTGGTAGTGGTGGAGAAGGATCAATTATTGGTGGTGGAGAGGGAAGTGGAAAGCGTAGCTCCGAGCTATCAACGGCGGAGAGACAAGAAATACAGATGAAGAAAGCTAAGCTAATTACCATGCTTGATGAGGTGGAACAAAGGTACAGACAGTATCACCATCAAATGGAGGTCGTAGTTTCCTCATTTGAACAAGCCGCCGGAATCGGCTCCGCGAGGACATACACTGCCCTTGCACTGCAAACAATCTCAAAGCAGTTTCGATGTTTGAAAGATGCAATAACAGGACAAATTAAAGCTGCAAATAAAAGCTTGGGTGAAGAGGATTGCTTTGGAGGTAAAATTGAAGGTTCAAGGCTCAAATATGTTGATCATCAACTACGTCAACAACGAGCTTTACAACAGTTGGGAATGATCCAGCACAATGCTTGGAGACCCCAAAGAGGATTGCCAGAAAGATCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAACACTTCCTCCACCCTTATCCAAAGGATTCAGACAAGCACATGCTTGCAAAACAAACAGGGCTTACTAGGAGTCAGGTTTCAAATTGGTTTATAAATGCTCGTGTTAGACTTTGGAAGCCAATGGTGGAAGAAATGTACTTGGAGGAGATGAAGGAGAATGAACTAAATGGTTCAGAGGATAAATCAAGCAAGAGCAATGAAGATTCATCAATGAAAATGACATCCCCTCCAGAAAAAGCTCTTACCTCTGAAACAGAACCAAAAGGTTACAATTCCACACAAGACATTTCCAAAAGCCAAGACACTCCAATCATCACTGTTTCTAGACCACAAACATCACCACTTGTTGGAAATGTTAGAAACAATTCAGGATTCAGCTTCATTGGATCATCAGAACTAGAAGGGATACCACAAGGAAGTCCTAAAAAACCAAGGAACCATGAACTTATGCATACCCCTAATAGTTTCATTGATGTTAAACACAATGAGGCAAATAATGAGGAACTATCAATAAAATTTGGTGATGAGAGGCAAAGTAGAGATGGTTACTCTTTTATGGGAAACCAAACAAATTTCATTGGTGGATTTGGACAATACCCAATTGGTGATATTGGTAGGTTTGACTCAGAACAATTCGCACCAAGGTTTTCAAGTAATAATGTTTCACTCACTCTTGGTCTTGATTCAATACAAGGAAATCATCAAACATTTCTACCAAACCAAAACATTCAACTAGGAAGAAGCATTGATATAAGTGAACCAAATGAGTTTGGTTCCATAAACACTTCCTCTCCTCAATATGAGAGTATCAACATGCAAAACCCAAAAAGGTTTGCTGCACAGTTGTTACCAGATTTTGTGTCCTAA 1995 0.4271 MATYYHGNSEIQSSGGGGGADGLQTLVLMNPSYIQYSDTTQQQQAQPPSHAAAGNYVFLNSTAAENNSFSPHAPSSNTQQFVGIPLNHQHQIHAHHDVVPSLHGFLPHMQYNQWNTIDPNTAARETPRAQQGLSLSLSSQPARFVSMSGGSPSPASGVTTTNNGNPGIQLLSSKYLRAAHELLEEVVNVNSGVELGKKSGGLNKVNIGESSGVGSGGEGSIIGGGEGSGKRSSELSTAERQEIQMKKAKLITMLDEVEQRYRQYHHQMEVVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIKAANKSLGEEDCFGGKIEGSRLKYVDHQLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKENELNGSEDKSSKSNEDSSMKMTSPPEKALTSETEPKGYNSTQDISKSQDTPIITVSRPQTSPLVGNVRNNSGFSFIGSSELEGIPQGSPKKPRNHELMHTPNSFIDVKHNEANNEELSIKFGDERQSRDGYSFMGNQTNFIGGFGQYPIGDIGRFDSEQFAPRFSSNNVSLTLGLDSIQGNHQTFLPNQNIQLGRSIDISEPNEFGSINTSSPQYESINMQNPKRFAAQLLPDFVS* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4470 664 SMART prehox3 165 308 IPR006563 -
Mal3g4470 664 MobiDBLite consensus disorder prediction 143 163 - -
Mal3g4470 664 MobiDBLite consensus disorder prediction 207 239 - -
Mal3g4470 664 SMART HOX_1 356 420 IPR001356 GO:0003677
Mal3g4470 664 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 617 - -
Mal3g4470 664 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 6 617 - -
Mal3g4470 664 ProSiteProfiles 'Homeobox' domain profile. 353 416 IPR001356 GO:0003677
Mal3g4470 664 MobiDBLite consensus disorder prediction 444 494 - -
Mal3g4470 664 MobiDBLite consensus disorder prediction 426 494 - -
Mal3g4470 664 Coils Coil 240 260 - -
Mal3g4470 664 MobiDBLite consensus disorder prediction 426 443 - -
Mal3g4470 664 Gene3D - 359 438 - -
Mal3g4470 664 SUPERFAMILY Homeodomain-like 357 423 IPR009057 -
Mal3g4470 664 Pfam Homeobox KN domain 373 412 IPR008422 GO:0003677|GO:0006355
Mal3g4470 664 CDD homeodomain 356 417 IPR001356 GO:0003677
Mal3g4470 664 Pfam Associated with HOX 170 307 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4470 Mal-Chr3 124517754 124522716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4470 1 664 Homeobox Transcription Factor Family AT2G35940 48.064 2.95e-170 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mal3g4470 POX 1.1e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4470 - - gmx:100810901 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4470 3 124517754 124522716 Mal3g4470 3 124517754 124522716 ECH
Mal3g4470 3 124517754 124522716 Mal1g3381 1 56817669 56821277 PCT