Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4466 ATGAACCACACAACACTCCTCTTTCTTCTCTTGCTTCTCTCACCTTCTCTAGTCCTCACAACCACAAACCCAACCGATCTCAAAATCCTTAACGACTTCAAAAACAACCTCGACAACCCAGACATCCTACAATGGCCCAAAAACAACAACGACCCATGTAGCAATCCCCCTTGGAAATACATCTTCTGTGACGGTGACAGAGTTTCACAGATTCAAACCAAAAACCTAAACCTTTCTGGTACTTTACCTCAAAATCTCAACCAACTAACCCAACTCGTCAACTTGGGTCTTCAAAATAACAAACTTCACGGTCCTTTACCGTCGCTAAAAGGGTTATCAAATCTCAAATACGTTTTTCTTGATAACAATGAATTCGAATCCATTCCTTTGGATTTCTTTCAAGGGTTAACCAGTTTAGAAACTCTTGCATTAGATAACAACAATCTCAATGTTACTACAAATGGTTGGAATTTTCCTTCTTCTTTGCAGGATTCACCTCAGTTAACGATTTTATCTTGCATGAGCTGTAATTTGGTTGGCCCTTTACCAGAATTTCTTGGAAAAATGAACTCTTTGTCAAATTTGAAGCTTTCTGGTAACAGTTTAACCGGTGAGATTCCTGCGAGTCTTAATAATTCAGGGTTGCAAATGTTGTGGTTGAATAACCAGAAGGGTGAGTTGTTATCTGGAAGTATTGATATTGTTGCTACTATGGTTTCTCTTACTAGTTTATGGCTGCATGGTAACCGGTTTACTGGTTCGATTCCGGAGAATATTGGTGACTTGGTTTCTCTTACAGATCTTAATCTTAATGGAAATGAGCTTGTTGGTCTTGTTCCTAGTTCTTTAGGTAATATGAAATTGGATAAGCTTGATTTGAATAATAACCGGTTTATGGGTCCGATTCCGAATTTTAAAGCTACTAAAGTTTCTTATAGTAACAATCATTTTTGTTTGAATGAAACTGGTGTTCCTTGTTCTTTTGAAGTTATGGCTCTTTTGGGGTTTCTTGGTGGGTTGAATTATCCTTCAAATTTGGTTGATTCATGGAGTGGGAATAACCCTTGTGAGGGGACTTGGTTGGGGATTAAATGCAATGCTGATGGTAAAGTTTCTATGATTAATATGCATAATTTTAATCTTAGTGGTACTTTAAGTCCTTCTGTTGCAAATTTAGGTTCTTTAGTTGAAATTAAATTGGGGGGTAATCATCTCAATGGCGTAGTACCTAGTAACTGGACTAGCTTGAGGAATTTGAATAAGTTGGATCTGAGTGACAATAATATTTCACCTCCTTTGCCGGTTTTTAGTAATGGATTGAAACCTAATGTTGATGGGAATTCTCTGTTGAATGGTGGAACCGAAGGTCCTTCGGGGAAAAACAGTCCATCGGGTGGATCTGGGAATAGTGGTGAAGATACGAAGGGAGGCTCAAATTCAAGTTCAGGTGATTCAGTTGAAACGAAAAAATCGAAAAAGAAAAGCTTGGTTTTGATTGTAGCTCCTATTGCTGGTGTGGCGGCTGCTGCTTTTCTGTTGATACCGCTTTACGCTTATTGTTTCAGGAGGACAAAGGATGGTTTCCAGGCTCCAAGTTCGCTCGTAGTTCACCCTAGAGATCCATCTGATTCGGACAGTACTGTAAAGATAGCTATTGCGAATAATGCCAATGGAAGTGTTTCCACTTTGACAGGGAGTGGGTCTGGGAGTAGAAACAGCAGTGCAATTGGGGAGTCTCATGTCATTGAAGCTGGAAATCTTGTGATATCAGTTCAAGTTCTAAGAAACGTTACAAAGAATTTCGCCCCTGAGAATGAGCTTGGCCGCGGTGGATTTGGAGTTGTTTATAAGGGAGAGTTGGAGGATGGAACTAAGATTGCTGTAAAAAGAATGGAAGCAGGTGTGATCACCAATAAAGCCTTGGATGAATTTCAGGCTGAAATTGCGGTTCTGTCGAAAGTTCGACATCGGCATCTAGTGGGCCTTATAGGTTATTCCACTGAAGGCAATGAGAGGATGCTAGTGTATGAGTATATGCCACAAGGTGCTCTCAGTCAGCATCTTTTCCATTGGAAAAGCTTGGGACTTGAACCTCTCTCTTGGAAGAGGAGGCTCAATATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTTCATACTCTGGCTCACCAGAGCTTCATTCATAGAGATCTTAAGTCCTCAAATATTTTGCTTGCTGATGATTTTAGAGCTAAAGTCTCAGATTTTGGATTGGTAAAACTTGCTCCAAATGGTGAAAAATCTGTAGTGACCAAACTTGCTGGAACCTTTGGATACCTGGCTCCAGAATATGCAGTGACAGGAAAAATCACAACCAAAGTAGATGTTTTCAGTTTTGGGGTTGTGCTAATGGAGCTGTTGTCTGGATTGATGGCACTTGATGAGGATAGACCTGAAGAAAGCCAATACTTGGCAGCATGGTTCTGGAATATAAAATCAGATAAGAAGAAACTAATGGCTGCTATTGACCCAACCCTTGACATAAACGAAGAAACATTCGAAAGTGTCGCAATTATTGCTGAGCTAGCTGGACACTGCACGGCTAGAGAACCAAACCAAAGGCCAGAAATGGGCCATGCTGTGAATGTTCTCGCACCCCTTGTTGAAAAATGGAAACCGTTTGACGATGACCCTGATGAGTATTCCGGCATTGATTATAGTCTTCCCCTTACCCAGATGGTGAAAGGATGGCAGGAGGCAGAAGGAAAAGACACGAGTTATATGGACCTAGAAGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGATTTGCAGATTCTTTTACTTCGGCCGATGGCCGGTGA 2844 0.4096 MNHTTLLFLLLLLSPSLVLTTTNPTDLKILNDFKNNLDNPDILQWPKNNNDPCSNPPWKYIFCDGDRVSQIQTKNLNLSGTLPQNLNQLTQLVNLGLQNNKLHGPLPSLKGLSNLKYVFLDNNEFESIPLDFFQGLTSLETLALDNNNLNVTTNGWNFPSSLQDSPQLTILSCMSCNLVGPLPEFLGKMNSLSNLKLSGNSLTGEIPASLNNSGLQMLWLNNQKGELLSGSIDIVATMVSLTSLWLHGNRFTGSIPENIGDLVSLTDLNLNGNELVGLVPSSLGNMKLDKLDLNNNRFMGPIPNFKATKVSYSNNHFCLNETGVPCSFEVMALLGFLGGLNYPSNLVDSWSGNNPCEGTWLGIKCNADGKVSMINMHNFNLSGTLSPSVANLGSLVEIKLGGNHLNGVVPSNWTSLRNLNKLDLSDNNISPPLPVFSNGLKPNVDGNSLLNGGTEGPSGKNSPSGGSGNSGEDTKGGSNSSSGDSVETKKSKKKSLVLIVAPIAGVAAAAFLLIPLYAYCFRRTKDGFQAPSSLVVHPRDPSDSDSTVKIAIANNANGSVSTLTGSGSGSRNSSAIGESHVIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELEDGTKIAVKRMEAGVITNKALDEFQAEIAVLSKVRHRHLVGLIGYSTEGNERMLVYEYMPQGALSQHLFHWKSLGLEPLSWKRRLNIALDVARGMEYLHTLAHQSFIHRDLKSSNILLADDFRAKVSDFGLVKLAPNGEKSVVTKLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLSGLMALDEDRPEESQYLAAWFWNIKSDKKKLMAAIDPTLDINEETFESVAIIAELAGHCTAREPNQRPEMGHAVNVLAPLVEKWKPFDDDPDEYSGIDYSLPLTQMVKGWQEAEGKDTSYMDLEDSKSSIPARPTGFADSFTSADGR* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4466 947 Gene3D Transferase(Phosphotransferase) domain 1 679 893 - -
Mal3g4466 947 SUPERFAMILY L domain-like 22 307 - -
Mal3g4466 947 Gene3D Ribonuclease Inhibitor 24 324 IPR032675 -
Mal3g4466 947 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Mal3g4466 947 Pfam Leucine rich repeat N-terminal domain 330 366 IPR013210 -
Mal3g4466 947 SMART serkin_6 601 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4466 947 MobiDBLite consensus disorder prediction 915 947 - -
Mal3g4466 947 Pfam Leucine rich repeat 113 153 IPR001611 GO:0005515
Mal3g4466 947 Pfam Leucine rich repeat 240 298 IPR001611 GO:0005515
Mal3g4466 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Mal3g4466 947 MobiDBLite consensus disorder prediction 444 488 - -
Mal3g4466 947 SUPERFAMILY L domain-like 329 436 - -
Mal3g4466 947 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 4 947 - -
Mal3g4466 947 SUPERFAMILY Protein kinase-like (PK-like) 579 877 IPR011009 -
Mal3g4466 947 ProSiteProfiles Protein kinase domain profile. 601 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g4466 947 Gene3D Ribonuclease Inhibitor 328 452 IPR032675 -
Mal3g4466 947 SMART LRR_typ_2 136 159 IPR003591 -
Mal3g4466 947 SMART LRR_typ_2 392 415 IPR003591 -
Mal3g4466 947 SMART LRR_typ_2 238 261 IPR003591 -
Mal3g4466 947 SMART LRR_typ_2 112 135 IPR003591 -
Mal3g4466 947 SMART LRR_typ_2 189 213 IPR003591 -
Mal3g4466 947 SMART LRR_typ_2 416 438 IPR003591 -
Mal3g4466 947 SMART LRR_typ_2 262 285 IPR003591 -
Mal3g4466 947 MobiDBLite consensus disorder prediction 444 485 - -
Mal3g4466 947 PANTHER OSJNBA0070M12.3 PROTEIN 4 947 - -
Mal3g4466 947 Gene3D Phosphorylase Kinase; domain 1 565 678 - -
Mal3g4466 947 Pfam Protein tyrosine and serine/threonine kinase 604 875 IPR001245 GO:0004672|GO:0006468
Mal3g4466 947 CDD STKc_IRAK 607 880 - -
Mal3g4466 947 ProSitePatterns Protein kinases ATP-binding region signature. 607 629 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4466 Mal-Chr3 124377162 124380929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4466 78 914 Receptor kinase-like Gene Family AT1G55610 30.684 5.16e-85 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mal3g4466 PK_Tyr_Ser-Thr 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4466 - - gmx:100305366 1406.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4466 3 124377162 124380929 Mal3g4466 3 124377162 124380929 ECH