Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4453 ATGTCCAACAAGTACTCTCAGTTGAATGATGCCTGCAACGGCCCCGCCATTCCACCGACGGAGCAACGCCGTGATAGAAGCTGCTGTTGCTGTCTCTTTAGCGTCTTTTGGAAGCTTCTAGCTGCACTTGCTGTCCTCTTTGGCCTCATAATCCTTATCTTCTATCTCATTGTTCAGCCCCGCACCTTCAAGTTCTCTGTTTCCAAAGCGGAACTAACCCAATTTGACTACACAAACAACACACTACACTACAACATGGTGCTCAACTTCACAGCCCACAACCCAAACAAAAAACTTGGCATCTATTACGACAAAGTTGAGGCTCGAGCATTCTACAAAGAATCAAGGTTTGCTAATGTCGATGTGATCACACATATGAACTCATTCCGCCAAGACAAGAAGAGAAGTGATCCCATGAGTGGCGTTTTCACAGGACAACAATTGTTGATGCTCGACACTCATCAAGTCTCCAAGTTTAACAAAGACAAGAGTGTTGGAGTTTATGATATCTATGTGAAACTCTACTTTAGGATTAGGTTCAAACTTGGTGACTCGATATCTCAGAATTACAAACCCAAGGTCAAATGTGACCTCAATGTTCCATTGAGTTCTAGTAATGCCACCGTTACCTTCAACCCAGTTTTGCCCACCAAGTGTCACGTTGAGTTCTAG 672 0.439 MSNKYSQLNDACNGPAIPPTEQRRDRSCCCCLFSVFWKLLAALAVLFGLIILIFYLIVQPRTFKFSVSKAELTQFDYTNNTLHYNMVLNFTAHNPNKKLGIYYDKVEARAFYKESRFANVDVITHMNSFRQDKKRSDPMSGVFTGQQLLMLDTHQVSKFNKDKSVGVYDIYVKLYFRIRFKLGDSISQNYKPKVKCDLNVPLSSSNATVTFNPVLPTKCHVEF* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4453 223 Pfam Late embryogenesis abundant protein 90 195 IPR004864 -
Mal3g4453 223 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 17 221 - -
Mal3g4453 223 PANTHER OS05G0367900 PROTEIN 17 221 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4453 Mal-Chr3 124193788 124194459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4453 57 215 SNARE and Associated Proteins AT1G32270 35.185 1.48e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4453 - - gmx:100807701 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4453 3 124193788 124194459 Mal3g4453 3 124193788 124194459 ECH
Mal3g4453 3 124193788 124194459 Mal1g3366 1 56164795 56165978 PCT