Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4449 ATGGAGTTTTGGGGTGTTGAGGTTAAACATGGAGAATCACTCAAGGTTGATCCAAAAGAGGACGAGATTATCAAAATTTCAACGGCTTGTCTGGGGGAGGTCAGCAAGGATAAAGGGAGTGAACCAGTATCCCTGTATGTGATGATTGGTGGTCAGAAGCTTCAACTTGGAACACTTTCTTCAGATAAATTTCCTCAGACACCTTTTGATTTGGCATTTGAGAAGCAATTTGAGCTATCCCATAACTGGAAATATGGGAGTGTCTTCTTTACTGGATTTAGAGTCGAATGTTACATGGAATCTTCATATCCTTTTAATACTATTTTATGTTGTCGTGAGATCTAA 345 0.3913 MEFWGVEVKHGESLKVDPKEDEIIKISTACLGEVSKDKGSEPVSLYVMIGGQKLQLGTLSSDKFPQTPFDLAFEKQFELSHNWKYGSVFFTGFRVECYMESSYPFNTILCCREI* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4449 114 Pfam Nucleoplasmin-like domain 3 93 IPR041232 -
Mal3g4449 114 Gene3D Nucleoplasmin core domain 1 98 - -
Mal3g4449 114 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 103 - -
Mal3g4449 114 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4449 Mal-Chr3 124159029 124160915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4449 1 97 C2H2 Transcription Factor Family AT5G03740 52.577 1.27e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4449 - - ccaj:109796568 160.614